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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "BiocDuckDB" in publications use:'
type: software
license: MIT
title: 'BiocDuckDB: Bioconductor DuckDB Integration and High-Level I/O'
version: 0.99.5
doi: 10.32614/CRAN.package.BiocDuckDB
abstract: Integration package providing high-level Parquet I/O functions and optimized
  methods for single-cell analysis workflows using DuckDB-backed data structures.
  Includes readParquet and writeParquet functions for seamless serialization of SummarizedExperiment,
  SingleCellExperiment, MultiAssayExperiment, and MultiAssaySpatialExperiment objects,
  plus SQL-optimized implementations of scran and scuttle methods for variance modeling,
  marker detection, QC metrics, and normalization. This package brings together DuckDBDataFrame,
  DuckDBArray, DuckDBGRanges, and DuckDBSpatial (optional) for complete Bioconductor
  integration.
authors:
- family-names: Aboyoun
  given-names: Patrick
  email: aboyounp@gene.com
repository: https://biocstaging.r-universe.dev
commit: 17137e0acaf3455f364399d1989149d6d3117396
date-released: '2026-07-22'
contact:
- family-names: Aboyoun
  given-names: Patrick
  email: aboyounp@gene.com