Package: GENCODEHub
Title: GENCODE AnnotationHub
Version: 0.99.0
Authors@R: person("Paul", "Ruiz Pinto", role = c("aut", "cre"),
            email = "ruizpint@qut.edu.au",
            comment = c(ORCID = "0009-0007-6714-3566"))
Description: Provides access through AnnotationHub to genomic
        annotation resources derived from GENCODE releases. The release
        50 collection represents every feature type in the human
        GRCh38.p14 GTF. Feature-specific GRanges objects retain the
        imported identifiers and attributes, while a TxDb resource
        supports gene, transcript, exon, and coding-sequence queries.
URL: https://github.com/paulYRP/GENCODEHub
BugReports: https://github.com/paulYRP/GENCODEHub/issues
License: Artistic-2.0
Encoding: UTF-8
Depends: R (>= 4.5.0)
Imports: AnnotationDbi, AnnotationHub, GenomicFeatures, GenomicRanges,
        methods
Suggests: AnnotationHubData, BiocStyle, digest, GenomeInfoDb, knitr,
        rmarkdown, rtracklayer, S4Vectors, testthat (>= 3.0.0),
        txdbmaker
VignetteBuilder: knitr
biocViews: AnnotationData, AnnotationHub, GenomicSequence,
        Homo_sapiens, PackageType, SequenceAnnotation, TxDb
Roxygen: list(markdown = TRUE)
Config/testthat/edition: 3
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-08-08 09:36:37 UTC
RemoteUrl: https://github.com/BiocStaging/GENCODEHub
RemoteRef: HEAD
RemoteSha: 183b1a52f7aa7b61cca764e4cfca4355c64ab76f
NeedsCompilation: no
Packaged: 2026-10-07 11:58:24 UTC; root
Author: Paul Ruiz Pinto [aut, cre] (ORCID:
    <https://orcid.org/0009-0007-6714-3566>)
Maintainer: Paul Ruiz Pinto <ruizpint@qut.edu.au>