Changes in version 0.99.0 - Ready for the submission to Bioconductor! Changes in version 0.9.1 - Better tooltip implementation - Highlighting of the nodes now takes care of graying out a bit more of elements that should indeed be not too much into the focus - Added export_kegg_graph() as a simple function to export the graphs to text files, for maximum compatibility with any framework (possibly even within Cytoscape) - Providing an example dataset already precomputed within the package to avoid additional dependency load; as a companion to this, added detailed information on how to create this in the inst/scripts folder - Finalized a full version of the vignette - Completed the configuration of the pkgdown documentation - Exporting also the cleanup_title_node() function to remove the title node in pathway graphs Changes in version 0.9.0 - Restructuring the API to use declarative function names, that possibly better convey the piece of functionality (create_kegg_graph() and render_kegg_graph() as the main workhorse) - The functions to retrieve the kgml files are now a bit more verbose if needed (retrieve_kgml() and retrieve_all_pathways()) - Subsetting and highlighting KEGG graphs is now possible with subset_kegg_graph() and highlight_kegg_graph(), subsequently to be passed to render_kegg_graph() - The cache & download is handled in a more homogeneous manner, with display_cache_KEGGemUP() and reset_cache_KEGGemUP() to check and reset the info retrieved - Mapping continuous values from different DE-results like containers is handled by map_results_to_graph() Changes in version 0.2.0 - Essential functionality implemented, from kgml files all the way down to rendering interactively Changes in version 0.1.0 - Getting the package ready with the full set of original features!