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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "LIPIDIFy" in publications use:'
type: software
license: MIT
title: 'LIPIDIFy: Comprehensive Lipidomics Data Analysis with Interactive Visualization'
version: 0.99.0
abstract: Provides a comprehensive toolkit for end-to-end lipidomics data analysis,
  including missing value imputation, batch effect correction, normalization, differential
  abundance analysis using limma and edgeR, gene set enrichment analysis, and extensive
  visualization capabilities. Lipid names are automatically classified by class, subclass,
  and fatty-acid saturation. Features both an interactive Shiny interface for bench
  biologists and fully scriptable R functions for bioinformaticians. Supports flexible
  custom lipid classification schemes and user-defined enrichment sets.
authors:
- family-names: Hammal
  given-names: Fayrouz
  email: fayrouz.hammal@petermac.org
  orcid: https://orcid.org/0000-0002-7612-4953
preferred-citation:
  type: manual
  title: 'LIPIDIFy: An Interactive R Package for End-to-End Lipidomics Analysis'
  authors:
  - family-names: Hammal
    given-names: Fayrouz
    email: fayrouz.hammal@petermac.org
    orcid: https://orcid.org/0000-0002-7612-4953
  year: '2026'
  notes: R package version 0.99.0
  url: https://github.com/hammalfayrouz/LIPIDIFy
repository: https://biocstaging.r-universe.dev
repository-code: https://github.com/fayrouzhammal/LIPIDIFy
commit: 9d5392819a532d95411457c07d475bc465ce806a
url: https://github.com/fayrouzhammal/LIPIDIFy
date-released: '2026-05-04'
contact:
- family-names: Hammal
  given-names: Fayrouz
  email: fayrouz.hammal@petermac.org
  orcid: https://orcid.org/0000-0002-7612-4953