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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MOTL" in publications use:'
type: software
license: GPL-3.0-only
title: 'MOTL: Multi-omics matrix factorization with transfer learning'
version: 0.99.1
doi: 10.1186/s13059-025-03675-7
identifiers:
- type: doi
  value: 10.32614/CRAN.package.MOTL
- type: url
  value: https://github.com/david-hirst/MOTL
abstract: A transfer learning algorithm for multi-omics matrix factorization called
  'MOTL' (Multi-Omics Transfer Learning). 'MOTL' is a Bayesian transfer learning method,
  based on 'MOFA'. 'MOTL' infers latent factor values for a multi-omics target dataset,
  consisting of a small number of samples, by incorporating latent factor values already
  inferred with a 'MOFA' factorization of a large, heterogeneous, learning dataset.
authors:
- family-names: Hirst
  given-names: David
  orcid: https://orcid.org/0000-0001-7574-5531
- family-names: Térézol
  given-names: Morgane
  email: morgane.terezol@univ-amu.fr
  orcid: https://orcid.org/0000-0002-4090-2573
preferred-citation:
  type: article
  title: 'MOTL: enhancing multi-omics matrix factorization with transfer learning'
  authors:
  - family-names: Hirst
    given-names: David P
  - family-names: Térézol
    given-names: Morgane
    email: morgane.terezol@univ-amu.fr
    orcid: https://orcid.org/0000-0002-4090-2573
  - family-names: Cantini
    given-names: Laura
  - family-names: Villoutreix
    given-names: Paul
  - family-names: Vignes
    given-names: Matthieu
  - family-names: Baudot
    given-names: Anaïs
  year: '2025'
  journal: Genome Biology
  volume: '26'
  issue: '1'
  doi: 10.1186/s13059-025-03675-7
repository: https://biocstaging.r-universe.dev
repository-code: https://github.com/MOohTus/MOTL/issues, https://github.com/david-hirst/MOTL
commit: 2b258d0a0ade3280d1d1d27dd0252b568ea04a3c
url: https://github.com/MOohTus/MOTL
date-released: '2026-06-19'
contact:
- family-names: Térézol
  given-names: Morgane
  email: morgane.terezol@univ-amu.fr
  orcid: https://orcid.org/0000-0002-4090-2573