Package: OmicsChrono
Title: Calendar-Aware Temporal Metadata for Longitudinal Omics
Version: 0.99.0
Authors@R: person(given = "Mateo", family = "Pedersen", email = "betacalendars@gmail.com", role = c("aut", "cre"))
Description: Longitudinal and circadian omics experiments encode sample
        time as elapsed experiment time, civil timestamps, or
        light-cycle coordinates. OmicsChrono validates and standardizes
        temporal sample metadata in SummarizedExperiment and derived
        Bioconductor containers while preserving assays and feature
        metadata. It supports elapsed-time annotation, sampling-window
        alignment, time-zone and daylight-saving diagnostics,
        Zeitgeber-time annotation, and temporal coverage summaries as
        reproducible preprocessing for downstream time-course analyses.
License: MIT + file LICENSE
Encoding: UTF-8
Depends: R (>= 4.5.0)
Imports: clock, S4Vectors, SummarizedExperiment, methods, stats
Suggests: BiocStyle, fission, knitr, rmarkdown, SingleCellExperiment,
        testthat (>= 3.0.0)
VignetteBuilder: knitr
biocViews: Software, TimeCourse, Preprocessing
URL: https://github.com/mateopedersen/OmicsChrono
BugReports: https://github.com/mateopedersen/OmicsChrono/issues
Config/testthat/edition: 3
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-10-06 08:57:24 UTC
RemoteUrl: https://github.com/BiocStaging/OmicsChrono
RemoteRef: HEAD
RemoteSha: 959908a08a6d2854ec2768c2ad8ccad0097e52e2
NeedsCompilation: no
Packaged: 2026-10-07 08:25:30 UTC; root
Author: Mateo Pedersen [aut, cre]
Maintainer: Mateo Pedersen <betacalendars@gmail.com>