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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "OmicsLake" in publications use:'
type: software
license: MIT
title: 'OmicsLake: OmicsLake: Versioned, On-Disk Omics Data Management for Bioconductor'
version: 0.99.3
doi: 10.32614/CRAN.package.OmicsLake
abstract: A lightweight framework for versioned, on-disk omics data management using
  DuckDB, Arrow, and Parquet. It provides read/write-style functions, snapshots, and
  version-aware dataset lineage for tracked or explicitly annotated workflows. Adapters
  preserve supported Bioconductor containers, including SummarizedExperiment and MultiAssayExperiment,
  while retaining queryable tabular components.
authors:
- family-names: Matsui
  given-names: Yusuke
  email: mail.to.matsui@gmail.com
  orcid: https://orcid.org/0000-0003-3977-4313
repository: https://biocstaging.r-universe.dev
repository-code: https://github.com/matsui-lab/OmicsLake
commit: 0d2b2fc7793e889f82a54deb6964649404a66bb6
url: https://github.com/matsui-lab/OmicsLake
date-released: '2026-07-15'
contact:
- family-names: Matsui
  given-names: Yusuke
  email: mail.to.matsui@gmail.com
  orcid: https://orcid.org/0000-0003-3977-4313