Package: OmniCorr
Title: Multi-omics Integration and Visualization Framework
Version: 0.99.0
Authors@R: 
    c(
        person(
            "Shashank", "Gupta",
            email = "bioinformaticssrm2011@gmail.com",
            role = "aut",
            comment = c(ORCID = "0000-0001-8839-7003")
        ),
        person(
            "Veronica", "Quarato",
            email = "vequa7472@nmbu.no",
            role = c("aut", "cre"),
            comment = c(ORCID = "0009-0008-4049-9746")
        ),
        person(
            "Wanxin", "Lai",
            role = "aut"
        )
    )
Description: OmniCorr is an R package for correlation-based integration
        and visualization of multi-omics datasets, including
        transcriptomics, metatranscriptomics, metagenomics,
        metaproteomics, and associated sample metadata. The package
        computes pairwise correlations between independently processed
        omics layers and provides flexible tools for organizing and
        visualizing cross-omics associations using aligned heatmaps and
        optional network-style visualizations. OmniCorr is designed to
        complement existing preprocessing and network inference
        workflows rather than replace them.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Depends: R (>= 4.5.0)
Imports: ComplexHeatmap, circlize, RColorBrewer, WGCNA, grid
Suggests: cowplot, knitr, pheatmap, rmarkdown, testthat
VignetteBuilder: knitr
biocViews: DimensionReduction, FeatureExtraction, Metabolomics,
        Metagenomics, Microbiome, NetworkInference, Preprocessing,
        Proteomics, Transcriptomics, Software
URL: https://github.com/veronicaquarato/OmniCorr
BugReports: https://github.com/veronicaquarato/OmniCorr/issues
Config/testthat/edition: 3
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: cmake make libicu-dev libpng-dev libuv1-dev perl
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-09-24 14:39:43 UTC
RemoteUrl: https://github.com/BiocStaging/OmniCorr
RemoteRef: HEAD
RemoteSha: 8085328a362eeeccb10d901d0cdd02f1f31752cc
NeedsCompilation: no
Packaged: 2026-09-24 15:24:36 UTC; root
Author: Shashank Gupta [aut] (ORCID: <https://orcid.org/0000-0001-8839-7003>),
  Veronica Quarato [aut, cre] (ORCID:
    <https://orcid.org/0009-0008-4049-9746>),
  Wanxin Lai [aut]
Maintainer: Veronica Quarato <vequa7472@nmbu.no>