Changes in version 0.99.0 (2026-04-24) New package release! - Initial public release of SimiCviz. - Includes the S4 containers: - SimiCvizExperiment for coordinated GRN weights, activity scores, labels, and metadata. - AUCProcessor for activity-score computation workflows. - Includes import utilities for: - SimiCPipeline outputs. - Generic CSV-based GRN and AUC inputs. - Optional Python-backed pickle/h5ad reading via reticulate interoperability. - Includes activity-score functionalities: - TF activity score calculation from expression and weights. - Dissimilarity score calculation. - Includes visualization functions for: - TF-target weight barplots. - TF network heatmaps. - AUC distributions, cumulative curves, and summary statistics. - Dissimilarity heatmaps across labels/cell groups. - Adjusted R2 distribution plots. Interoperability - Python-based pickle/h5ad reading is optional. - Interoperability support is included for workflows that commonly use SimiCPipeline python outputs. - Outputs from alternative algorithms for gene regulatory network are also compativle in standard csv format input.