Package: SpectraStash
Title: Serialize and restore Spectra objects in interoperable file
        formats
Version: 0.99.0
Authors@R: 
    c(person(given = "Johannes", family = "Rainer",
             email = "Johannes.Rainer@eurac.edu",
             role = c("aut", "cre"),
             comment = c(ORCID = "0000-0002-6977-7147")),
      person(given = "Philippine", family = "Louail",
             email = "philippine.louail@eurac.edu",
             role = "aut",
             comment = c(ORCID = "0009-0007-5429-6846")),
      person(given = "Laurent", family = "Gatto",
             email = "laurent.gatto@uclouvain.be",
             role = "ctb",
             comment = c(ORCID = "0000-0002-1520-2268")),
      person(given = "Gabriele", family = "Tomè",
             email = "gabriele.tome@eurac.edu",
             role = c("ctb"),
             comment = c(ORCID = "0000-0002-3976-6068",
             fnd = "MetaRbolomics4Galaxy project (CUP: D53C25001030003) co-funded by the Autonomous Province of Bolzano under the Joint Projects South Tyrol–Germany 2025 program.")))
Description: The serialization mechanism of R allows to save and load R
        data objects in a binary format, that can however not be read
        by other programming languages or software. The SpectraStash
        package implements the serialization methods from the MsStash
        package for Spectra objects and its MsBackend classes. A
        variety of different file formats and types, including HDF5 and
        JSON-based formats defined by the Bioconductor *alabaster*
        package are supported. The file type can be defined and
        configured through a second argument `param` of the save/read
        methods.
Depends: R (>= 4.5.0), MsStash
Imports: methods, Spectra (>= 1.23.2), utils, S4Vectors,
        alabaster.base, jsonlite, BiocParallel
Suggests: BiocStyle, MsDataHub, testthat, mzR, fs, knitr, pkgload,
        callr
License: GPL-3
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/SpectraStash/issues
URL: https://github.com/RforMassSpectrometry/SpectraStash
biocViews: Infrastructure, MassSpectrometry, Metabolomics, DataImport,
        Proteomics
Roxygen: list(markdown=TRUE)
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: cmake make libuv1-dev libssl-dev libnode-dev
        zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-07-22 13:43:41 UTC
RemoteUrl: https://github.com/BiocStaging/SpectraStash
RemoteRef: HEAD
RemoteSha: 17f43f21fbbc68082d5af4998a1c0c3b82e34be6
NeedsCompilation: no
Packaged: 2026-07-22 14:46:39 UTC; root
Author: Johannes Rainer [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-6977-7147>),
  Philippine Louail [aut] (ORCID:
    <https://orcid.org/0009-0007-5429-6846>),
  Laurent Gatto [ctb] (ORCID: <https://orcid.org/0000-0002-1520-2268>),
  Gabriele Tomè [ctb] (ORCID: <https://orcid.org/0000-0002-3976-6068>,
    fnd: MetaRbolomics4Galaxy project (CUP: D53C25001030003) co-funded
    by the Autonomous Province of Bolzano under the Joint Projects
    South Tyrol–Germany 2025 program.)
Maintainer: Johannes Rainer <Johannes.Rainer@eurac.edu>