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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "TiDEomics" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'TiDEomics: Time-course Differential Expression analysis of omics data'
version: 0.99.1
doi: 10.32614/CRAN.package.TiDEomics
abstract: TiDEomics provides tools for time-course omics data analysis, focusing on
  differential expression across multiple experimental groups (>2 conditions). The
  package implements workflows for quality control, data processing, and analysis
  of temporal patterns, enabling integrated analysis of all groups in addition to
  pairwise comparisons. It supports datasets with missing values, including mass spectrometry-based
  proteomics, and operates on SummarizedExperiment objects to ensure compatibility
  with the Bioconductor ecosystem.
authors:
- family-names: He
  given-names: Tianen
  email: tianen.he@ndm.ox.ac.uk
  orcid: https://orcid.org/0000-0001-6864-0723
repository: https://biocstaging.r-universe.dev
repository-code: https://github.com/hte123/TiDEomics
commit: 6f1fffe160a525a5c392986bcce127b6e74cf5a2
url: https://hte123.github.io/TiDEomics
date-released: '2026-04-29'
contact:
- family-names: He
  given-names: Tianen
  email: tianen.he@ndm.ox.ac.uk
  orcid: https://orcid.org/0000-0001-6864-0723