Package: TxDb.Gmax.JGI.Gmv4
Title: Transcripts Annotation Database for Soybean
Version: 0.99.1
Authors@R: 
    c(
      person("Dwijesh Chandra", "Mishra",
             role="aut",
             email="dwij.mishra@gmail.com",
             comment=c(ORCID="0000-0002-3327-6156")),
      person("Kabilan", "S",
             role=c("aut","cre"),
             email="kabilan151414@gmail.com",
             comment=c(ORCID="0009-0002-9422-0938")),
      person("ICAR-IARI",
             role="fnd",
             email="info@iari.res.in")
    )
Description: TxDb.Gmax.JGI.Gmv4 provides transcript, exon, and CDS
        annotations for soybean (Glycine max Wm82.a4.v1). It is a
        Bioconductor TxDb object built from the official JGI/Phytozome
        GFF3 annotation and is available via AnnotationHub (retrievable
        with AnnotationHub()); after loading you can use
        GenomicFeatures accessors (genes(), transcripts(), exonsBy(),
        cdsBy()) to extract gene models identified by JGI/Phytozome
        locus IDs.
Depends: R (>= 4.5.0)
Imports: stats, GenomicFeatures, GenomicRanges, AnnotationHub
Suggests: BiocManager, BiocStyle, knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
License: Artistic-2.0
Encoding: UTF-8
URL: https://github.com/kabilanbio/TxDb.Gmax.JGI.Gmv4
BugReports: https://github.com/kabilanbio/TxDb.Gmax.JGI.Gmv4/issues
biocViews: AnnotationData, TxDb, Glycine_max, SequenceAnnotation,
        AnnotationHub
Config/testthat/edition: 3
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-09-04 17:30:57 UTC
RemoteUrl: https://github.com/BiocStaging/TxDb.Gmax.JGI.Gmv4
RemoteRef: HEAD
RemoteSha: d6537e9eab880f40465224fcda3fad3eb1e2df46
NeedsCompilation: no
Packaged: 2026-10-04 11:34:43 UTC; root
Author: Dwijesh Chandra Mishra [aut] (ORCID:
    <https://orcid.org/0000-0002-3327-6156>),
  Kabilan S [aut, cre] (ORCID: <https://orcid.org/0009-0002-9422-0938>),
  ICAR-IARI [fnd]
Maintainer: Kabilan S <kabilan151414@gmail.com>