Package: alabaster.treese
Title: Load and Save TreeSummarizedExperiment from File
Version: 0.99.0
Date: 2026-10-28
Authors@R: 
    c(person(given = "Tuomas", family = "Borman", role = c("aut", "cre"),
             email = "tuomas.v.borman@utu.fi",
             comment = c(ORCID = "0000-0002-8563-8884")),
      person(given = "Leo", family = "Lahti", role = c("aut"),
             email = "leo.lahti@iki.fi",
             comment = c(ORCID = "0000-0001-5537-637X"))
    )
Description: Save TreeSummarizedExperiment into file artifacts, and
        load them back into memory. This is a more portable alternative
        to serialization of such objects into RDS files. Each artifact
        is associated with metadata for further interpretation;
        downstream applications can enrich this metadata with
        context-specific properties.
biocViews: DataImport, DataRepresentation, Phylogenetics, Microbiome
License: Artistic-2.0
URL: https://github.com/microbiome/alabaster.treese,
        https://microbiome.github.io/alabaster.treese
BugReports: https://github.com/microbiome/alabaster.treese/issues
Depends: TreeSummarizedExperiment, alabaster.base
Imports: methods, alabaster.sce, alabaster.string, Biostrings, jsonlite
Suggests: ape, knitr, testthat, BiocStyle, rmarkdown
VignetteBuilder: knitr
Encoding: UTF-8
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
        libnode-dev zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-10-29 11:25:21 UTC
RemoteUrl: https://github.com/BiocStaging/alabaster.treese
RemoteRef: HEAD
RemoteSha: 1b91678e3b3847697960d0914eff8ae48d8f6948
NeedsCompilation: no
Packaged: 2026-10-29 17:15:33 UTC; root
Author: Tuomas Borman [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-8563-8884>),
  Leo Lahti [aut] (ORCID: <https://orcid.org/0000-0001-5537-637X>)
Maintainer: Tuomas Borman <tuomas.v.borman@utu.fi>