{ "_id": "6ad7c4afd556c3a3418a7a73", "Package": "HTAN", "Type": "Package", "Title": "Query and Retrieve Human Tumor Atlas Network (HTAN) Open-Access\nData", "Version": "0.99.1", "Date": "2026-10-14", "Authors@R": "c(person(given = \"Sean\",\nfamily = \"Davis\",\nrole = c(\"aut\", \"cre\"),\nemail = \"seandavi@gmail.com\",\ncomment = c(ORCID = \"0000-0002-8991-6458\")),\nperson(given = \"National Cancer Institute\",\nrole = \"fnd\",\ncomment = \"Grant U24CA289073\"))", "Description": "A client for the open-access data of the Human Tumor Atlas\nNetwork (HTAN), Phase 1. File, biospecimen, clinical and\nprovenance metadata are queried locally from a versioned\nparquet snapshot of the ISB-CGC HTAN BigQuery release tables,\nthrough DuckDB and dbplyr, with no Google account. Open-access\nfiles are downloaded from the CRDC General Commons (anonymous\nGA4GH DRS) or Synapse (personal access token), and common HTAN\nfile formats are read into Bioconductor classes such as\nSingleCellExperiment, SpatialExperiment and\nMultiAssayExperiment.", "License": "MIT + file LICENSE", "URL": "https://github.com/seandavi/HTAN, https://seandavi.github.io/HTAN/", "BugReports": "https://github.com/seandavi/HTAN/issues", "SystemRequirements": "Quarto command line tool\n().", "biocViews": "DataImport, DataRepresentation, BiomedicalInformatics,\nSingleCell, Spatial, ThirdPartyClient, Transcriptomics", "VignetteBuilder": "quarto", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "Config/roxygen2/version": "8.1.0", "Config/testthat/edition": "3", "Config/pak/sysreqs": "libmagick++-dev gsfonts libicu-dev libssl-dev\nxz-utils zlib1g-dev", "Repository": "https://biocstaging.r-universe.dev", "Date/Publication": "2026-10-20 11:34:42 UTC", "RemoteUrl": 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