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    },
    {
      "page": "ol_aggregate",
      "title": "Aggregate data with multiple statistics",
      "topics": [
        "ol_aggregate"
      ]
    },
    {
      "page": "ol_checkout",
      "title": "Restore entire project to a labeled state",
      "topics": [
        "ol_checkout"
      ]
    },
    {
      "page": "ol_commit",
      "title": "Commit with metadata (note and parameters)",
      "topics": [
        "ol_commit"
      ]
    },
    {
      "page": "ol_compare_versions",
      "title": "Compare versions of an object",
      "topics": [
        "ol_compare_versions"
      ]
    },
    {
      "page": "ol_create_view",
      "title": "Create a database view",
      "topics": [
        "ol_create_view"
      ]
    },
    {
      "page": "ol_cumulative_sum",
      "title": "Calculate cumulative sum",
      "topics": [
        "ol_cumulative_sum"
      ]
    },
    {
      "page": "ol_disable_transparent_tracking",
      "title": "Disable transparent background tracking and optionally commit results",
      "topics": [
        "ol_disable_transparent_tracking"
      ]
    },
    {
      "page": "ol_drop",
      "title": "Drop (delete) a table from the project",
      "topics": [
        "ol_drop"
      ]
    },
    {
      "page": "ol_drop_object",
      "title": "Drop (delete) an object from the project",
      "topics": [
        "ol_drop_object"
      ]
    },
    {
      "page": "ol_drop_view",
      "title": "Drop a database view",
      "topics": [
        "ol_drop_view"
      ]
    },
    {
      "page": "ol_enable_strict_repro_mode",
      "title": "Enable Strict Reproducibility Mode",
      "topics": [
        "ol_enable_strict_repro_mode"
      ]
    },
    {
      "page": "ol_enable_transparent_tracking",
      "title": "Enable transparent background tracking for a session",
      "topics": [
        "ol_enable_transparent_tracking"
      ]
    },
    {
      "page": "ol_export_parquet",
      "title": "Export a table or object to a Parquet file",
      "topics": [
        "ol_export_parquet"
      ]
    },
    {
      "page": "ol_fread",
      "title": "fread-like reader for Parquet tables",
      "topics": [
        "ol_fread"
      ]
    },
    {
      "page": "ol_get_dependencies",
      "title": "Get dependencies for a table or object",
      "topics": [
        "ol_get_dependencies"
      ]
    },
    {
      "page": "ol_import_parquet",
      "title": "Import a Parquet file into the project",
      "topics": [
        "ol_import_parquet"
      ]
    },
    {
      "page": "ol_init",
      "title": "Initialize an OmicsLake project",
      "topics": [
        "ol_init"
      ]
    },
    {
      "page": "ol_label",
      "title": "Label current state with a human-friendly alias",
      "topics": [
        "ol_label"
      ]
    },
    {
      "page": "ol_list_labels",
      "title": "List all project-level labels",
      "topics": [
        "ol_list_labels"
      ]
    },
    {
      "page": "ol_list_object_versions",
      "title": "List all versions of an object",
      "topics": [
        "ol_list_object_versions"
      ]
    },
    {
      "page": "ol_list_objects",
      "title": "List all saved objects in the project",
      "topics": [
        "ol_list_objects"
      ]
    },
    {
      "page": "ol_list_tables",
      "title": "List all tables in the project",
      "topics": [
        "ol_list_tables"
      ]
    },
    {
      "page": "ol_list_tags",
      "title": "List all tags for a table or all project labels",
      "topics": [
        "ol_list_tags"
      ]
    },
    {
      "page": "ol_list_views",
      "title": "List all views in the project",
      "topics": [
        "ol_list_views"
      ]
    },
    {
      "page": "ol_load",
      "title": "Alias of 'ol_read()'",
      "topics": [
        "ol_load"
      ]
    },
    {
      "page": "ol_log",
      "title": "Return version log for a table",
      "topics": [
        "ol_log"
      ]
    },
    {
      "page": "ol_log_commits",
      "title": "View commit history",
      "topics": [
        "ol_log_commits"
      ]
    },
    {
      "page": "ol_moving_avg",
      "title": "Calculate moving average",
      "topics": [
        "ol_moving_avg"
      ]
    },
    {
      "page": "ol_plot_lineage",
      "title": "Visualize dependency lineage as a graph",
      "topics": [
        "ol_plot_lineage"
      ]
    },
    {
      "page": "ol_query",
      "title": "Execute a custom SQL query on the OmicsLake database",
      "topics": [
        "ol_query"
      ]
    },
    {
      "page": "ol_read",
      "title": "Read a table by name and reference",
      "topics": [
        "ol_read"
      ]
    },
    {
      "page": "ol_read_mae",
      "title": "Compose a MultiAssayExperiment",
      "topics": [
        "ol_read_mae"
      ]
    },
    {
      "page": "ol_read_object",
      "title": "Read a stored object",
      "topics": [
        "ol_read_object"
      ]
    },
    {
      "page": "ol_read_se",
      "title": "Build a SummarizedExperiment from long table",
      "topics": [
        "ol_read_se"
      ]
    },
    {
      "page": "ol_save",
      "title": "Save an R object via the backend metadata table",
      "topics": [
        "ol_save"
      ]
    },
    {
      "page": "ol_show_lineage",
      "title": "Show lineage (full dependency tree) for a table or object",
      "topics": [
        "ol_show_lineage"
      ]
    },
    {
      "page": "ol_tag",
      "title": "Tag a table by creating a backup",
      "topics": [
        "ol_tag"
      ]
    },
    {
      "page": "ol_tag_object",
      "title": "Tag a stored object version",
      "topics": [
        "ol_tag_object"
      ]
    },
    {
      "page": "ol_top_n",
      "title": "Get top N rows",
      "topics": [
        "ol_top_n"
      ]
    },
    {
      "page": "ol_write",
      "title": "Write a table using the DuckDB backend",
      "topics": [
        "ol_write"
      ]
    },
    {
      "page": "operators",
      "title": "Custom Query Operators",
      "topics": [
        "operators"
      ]
    },
    {
      "page": "PhosphoproteomicsAdapter",
      "title": "Phosphoproteomics Adapter",
      "topics": [
        "PhosphoproteomicsAdapter"
      ]
    },
    {
      "page": "print.lake_observation",
      "title": "Print method for lake_observation",
      "topics": [
        "print.lake_observation"
      ]
    },
    {
      "page": "print.lake_repair_report",
      "title": "Print method for lake_repair_report",
      "topics": [
        "print.lake_repair_report"
      ]
    },
    {
      "page": "ProteomicsAdapter",
      "title": "Proteomics Adapter",
      "topics": [
        "ProteomicsAdapter"
      ]
    },
    {
      "page": "put",
      "title": "Write data to the default lake",
      "topics": [
        "put"
      ]
    },
    {
      "page": "QFeaturesAdapter",
      "title": "QFeatures Adapter",
      "topics": [
        "QFeaturesAdapter"
      ]
    },
    {
      "page": "query",
      "title": "Start a query builder on the default lake",
      "topics": [
        "query"
      ]
    },
    {
      "page": "QueryBuilder",
      "title": "QueryBuilder - Fluent Query Interface",
      "topics": [
        "QueryBuilder"
      ]
    },
    {
      "page": "RaggedExperimentAdapter",
      "title": "RaggedExperiment Adapter",
      "topics": [
        "RaggedExperimentAdapter"
      ]
    },
    {
      "page": "record_read",
      "title": "Manually record a file read for observation",
      "topics": [
        "record_read"
      ]
    },
    {
      "page": "record_write",
      "title": "Manually record a file write for observation",
      "topics": [
        "record_write"
      ]
    },
    {
      "page": "ref",
      "title": "Get a lazy reference from the default lake",
      "topics": [
        "ref"
      ]
    },
    {
      "page": "register_adapter",
      "title": "Register a data adapter",
      "topics": [
        "register_adapter"
      ]
    },
    {
      "page": "restore",
      "title": "Restore the default lake to a snapshot",
      "topics": [
        "restore"
      ]
    },
    {
      "page": "save_as",
      "title": "Save pipe result to lake",
      "topics": [
        "save_as"
      ]
    },
    {
      "page": "SCEAdapter",
      "title": "SingleCellExperiment Adapter",
      "topics": [
        "SCEAdapter"
      ]
    },
    {
      "page": "SEAdapter",
      "title": "SummarizedExperiment Adapter",
      "topics": [
        "SEAdapter"
      ]
    },
    {
      "page": "SeuratAdapter",
      "title": "Seurat Adapter",
      "topics": [
        "SeuratAdapter"
      ]
    },
    {
      "page": "shortcuts",
      "title": "Global Lake Shortcuts",
      "topics": [
        "shortcuts"
      ]
    },
    {
      "page": "show_migration_guide",
      "title": "Show migration guide for ol_* to Lake API",
      "topics": [
        "show_migration_guide"
      ]
    },
    {
      "page": "snap",
      "title": "Create a snapshot of the default lake",
      "topics": [
        "snap"
      ]
    },
    {
      "page": "SpatialExperimentAdapter",
      "title": "SpatialExperiment Adapter",
      "topics": [
        "SpatialExperimentAdapter"
      ]
    },
    {
      "page": "SpectraAdapter",
      "title": "Spectra Adapter",
      "topics": [
        "SpectraAdapter"
      ]
    },
    {
      "page": "sql",
      "title": "Execute SQL on the default lake",
      "topics": [
        "sql"
      ]
    },
    {
      "page": "starts_with_str",
      "title": "Check if string starts with a prefix",
      "topics": [
        "starts_with_str"
      ]
    },
    {
      "page": "tables",
      "title": "List tables in the default lake",
      "topics": [
        "tables"
      ]
    },
    {
      "page": "tag",
      "title": "Tag data in the default lake",
      "topics": [
        "tag"
      ]
    },
    {
      "page": "trace_calls",
      "title": "Trace function calls for lineage",
      "topics": [
        "trace_calls"
      ]
    },
    {
      "page": "track_pipeline",
      "title": "Track a pipeline block into a Lake with minimal boilerplate",
      "topics": [
        "track_pipeline"
      ]
    },
    {
      "page": "track_script",
      "title": "Track an existing analysis script with one function call",
      "topics": [
        "track_script"
      ]
    },
    {
      "page": "TranscriptomicsAdapter",
      "title": "Transcriptomics Adapter",
      "topics": [
        "TranscriptomicsAdapter"
      ]
    },
    {
      "page": "tree",
      "title": "Show lineage tree from the default lake",
      "topics": [
        "tree"
      ]
    },
    {
      "page": "unlink_dep",
      "title": "Unlink a dependency",
      "topics": [
        "unlink_dep"
      ]
    },
    {
      "page": "use_lake",
      "title": "Set or get the default lake",
      "topics": [
        "use_lake"
      ]
    },
    {
      "page": "VCFAdapter",
      "title": "VCF Adapter",
      "topics": [
        "VCFAdapter"
      ]
    },
    {
      "page": "with_tracking",
      "title": "Track a code block with explicit lake integration",
      "topics": [
        "with_tracking"
      ]
    },
    {
      "page": "wrap",
      "title": "Function Wrapping for Lineage Tracking",
      "topics": [
        "wrap"
      ]
    },
    {
      "page": "wrap_call",
      "title": "Wrap a function call inline",
      "topics": [
        "wrap_call"
      ]
    },
    {
      "page": "wrap_fn",
      "title": "Wrap a function with lineage tracking",
      "topics": [
        "wrap_fn"
      ]
    },
    {
      "page": "XCMSAdapter",
      "title": "XCMS Adapter",
      "topics": [
        "XCMSAdapter"
      ]
    }
  ],
  "_readme": "https://github.com/BiocStaging/OmicsLake/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "arrow",
    "assertthat",
    "Biobase",
    "BiocGenerics",
    "bit",
    "bit64",
    "blob",
    "cli",
    "cpp11",
    "DBI",
    "dbplyr",
    "DelayedArray",
    "dplyr",
    "duckdb",
    "generics",
    "GenomicRanges",
    "glue",
    "IRanges",
    "jsonlite",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "rlang",
    "S4Arrays",
    "S4Vectors",
    "Seqinfo",
    "SparseArray",
    "stringi",
    "stringr",
    "SummarizedExperiment",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr",
    "XVector"
  ],
  "_vignettes": [
    {
      "source": "omicslake_comprehensive_guide_EN.Rmd",
      "filename": "omicslake_comprehensive_guide_EN.html",
      "title": "OmicsLake Comprehensive Guide",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Before you run all chunks",
        "Main package features",
        "1. Basic operations",
        "1.1 Project initialization",
        "1.2 Writing and reading tables",
        "1.3 Advanced analysis with SQL queries (ol_query)",
        "JOINs and subqueries",
        "Lazy evaluation and integration with dplyr",
        "1.4 Advanced analysis with aggregation and window functions",
        "Calculating gene expression statistics",
        "Ranking genes",
        "Moving average and cumulative sum",
        "Combining with lazy evaluation",
        "1.5 Saving and loading R objects",
        "2. Tracking dependencies",
        "2.1 Saving data with specified dependencies",
        "2.2 Checking dependencies",
        "2.3 Importing and exporting Parquet files",
        "Parquet export",
        "Parquet import",
        "Performance tips",
        "3. Version management",
        "3.1 Tagging and labeling",
        "3.2 Creating multiple versions",
        "3.3 Listing and comparing versions",
        "3.4 Loading a specific version",
        "4. Commits and history management",
        "4.1 Creating commits",
        "4.2 Viewing history",
        "5. Visualizing dependencies",
        "5.1 Creating dependency graphs",
        "6. Restoring a project",
        "6.1 Restoring state using labels",
        "7. Advanced features",
        "7.1 Filtered data loading",
        "7.2 Loading with lazy evaluation",
        "7.3 Deleting tables",
        "8. Bioconductor integration",
        "8.1 Creating a SummarizedExperiment",
        "8.2 Creating a MultiAssayExperiment",
        "9. Practical workflow example",
        "9.1 Complete differential expression analysis workflow",
        "10. Conclusion",
        "List of key functions",
        "Project management",
        "Data saving and loading",
        "Version management",
        "History management",
        "Dependencies",
        "Listing",
        "Bioconductor",
        "Others",
        "Best practices",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
      "commits": 1
    },
    {
      "source": "omicslake_layer_use_cases_EN.Rmd",
      "filename": "omicslake_layer_use_cases_EN.html",
      "title": "OmicsLake Layer-by-Layer Use Cases",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Before you run all chunks",
        "Covered layers",
        "Initialization",
        "1. Bulk RNA-seq (SummarizedExperiment)",
        "2. Single-cell RNA-seq (SingleCellExperiment)",
        "3. Multi-omics cohort (MultiAssayExperiment)",
        "4. Proteomics / Metabolomics raw MS (Spectra)",
        "5. Proteomics quantification graph (QFeatures)",
        "6. Integrated LC-MS container (MsExperiment)",
        "7. Cross-layer release manifest",
        "8. Validation with Tutorial-Derived Data",
        "8.1 Official MultiAssayExperiment data (miniACC)",
        "8.2 Official Spectra data (fft_spectrum)",
        "9. Automated Effectiveness Checks",
        "Summary",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
      "commits": 1
    },
    {
      "source": "omicslake_practical_workflow_EN.Rmd",
      "filename": "omicslake_practical_workflow_EN.html",
      "title": "OmicsLake Practical Workflow: Integrating Phase 1-4 Functions",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Before you run all chunks",
        "Project setup",
        "Preparing the data",
        "Phase 1: Filtering data with SQL queries",
        "Phase 2: Statistical analysis with aggregation functions",
        "Calculate statistics for each gene",
        "Extract top expressed genes",
        "Add rankings",
        "Compute cumulative statistics",
        "Phase 3: Sharing results with Parquet",
        "Exporting results",
        "Importing external data",
        "Phase 4: Compare multiple versions with database views",
        "Scenario: Compare two different analysis methods",
        "Create a view: Compare methods",
        "Using the view: Check concordance",
        "Create multiple views",
        "List views",
        "Deleting views",
        "Integrated workflow example: Combine all features",
        "Practical tips and best practices",
        "Use cases for Phase 1 (SQL queries)",
        "Use cases for Phase 2 (aggregation functions)",
        "Use cases for Phase 3 (Parquet)",
        "Use cases for Phase 4 (views)",
        "Combination patterns",
        "Summary",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
      "commits": 1
    },
    {
      "source": "lake_quickstart_EN.Rmd",
      "filename": "lake_quickstart_EN.html",
      "title": "OmicsLake v2.0 Quick Start Guide",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Before you run all chunks",
        "Recommended Next Guides",
        "Key Features",
        "Installation",
        "Basic Usage",
        "Initializing a Lake",
        "Storing and Reading Data",
        "Filtering with Formula Syntax",
        "dplyr Integration (Automatic Lineage Tracking)",
        "Joining Multiple Tables",
        "QueryBuilder",
        "Version Control",
        "Snapshots and Tags",
        "Viewing History",
        "Lineage (Data Provenance)",
        "Checking Dependencies",
        "Lineage Visualization",
        "Lightweight Mode (Integrating with Existing Code)",
        "observe: Track without Code Changes",
        "wrap: Wrap Functions for Tracking",
        "Defining Pipelines",
        "Custom Operators",
        "Bracket Notation",
        "Import/Export",
        "Bioconductor Integration",
        "Global Shortcuts",
        "Migration from Legacy API",
        "Summary",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
      "commits": 1
    },
    {
      "source": "lake_quickstart.Rmd",
      "filename": "lake_quickstart.html",
      "title": "OmicsLake v2.0 クイックスタートガイド",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "はじめに",
        "全コードを実行する前に",
        "次に読むガイド",
        "主な特徴",
        "インストール",
        "基本的な使い方",
        "Lakeの初期化",
        "データの保存と読み込み",
        "Formula構文でフィルタリング",
        "dplyr統合（自動リネージ追跡）",
        "複数テーブルのJOIN",
        "QueryBuilder",
        "バージョン管理",
        "スナップショットとタグ",
        "履歴の確認",
        "リネージ（データ系譜）",
        "依存関係の確認",
        "リネージの可視化",
        "軽量モード（既存コードへの導入）",
        "observe: コード変更なしで追跡",
        "wrap: 関数をラップして追跡",
        "パイプラインの定義",
        "カスタム演算子",
        "ブラケット記法",
        "インポート/エクスポート",
        "Bioconductor統合",
        "グローバルショートカット",
        "旧APIからの移行",
        "まとめ",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
      "commits": 1
    },
    {
      "source": "omicslake_layer_use_cases.Rmd",
      "filename": "omicslake_layer_use_cases.html",
      "title": "OmicsLake レイヤー別ユースケース集",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "はじめに",
        "全コードを実行する前に",
        "対象レイヤー",
        "初期化",
        "1. Bulk RNA-seq (SummarizedExperiment)",
        "2. Single-cell RNA-seq (SingleCellExperiment)",
        "3. Multi-omics cohort (MultiAssayExperiment)",
        "4. Proteomics / Metabolomics raw MS (Spectra)",
        "5. Proteomics quantification graph (QFeatures)",
        "6. LC-MS統合コンテナ (MsExperiment)",
        "7. クロスレイヤーの公開マニフェスト",
        "8. チュートリアル由来データでの検証",
        "8.1 MultiAssayExperiment公式データ (miniACC)",
        "8.2 Spectra公式データ (fft_spectrum)",
        "9. 有効性チェック（自動）",
        "まとめ",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
      "commits": 1
    },
    {
      "source": "omicslake_practical_workflow.Rmd",
      "filename": "omicslake_practical_workflow.html",
      "title": "OmicsLake 実践ワークフロー: フェーズ1-4機能の統合活用",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "はじめに",
        "全コードを実行する前に",
        "プロジェクトのセットアップ",
        "データの準備",
        "Phase 1: SQLクエリによるデータフィルタリング",
        "Phase 2: 集計関数による統計解析",
        "遺伝子ごとの統計量を計算",
        "発現量上位の遺伝子を抽出",
        "ランキングを追加",
        "累積統計の計算",
        "Phase 3: Parquetでの結果共有",
        "結果のエクスポート",
        "外部データのインポート",
        "Phase 4: データベースビューで複数バージョンを比較",
        "シナリオ: 2つの異なる解析手法を比較",
        "ビューの作成: 手法間の比較",
        "ビューの活用: 一致度の確認",
        "複数のビューを作成",
        "ビューの一覧表示",
        "ビューの削除",
        "統合ワークフロー例: 全機能を組み合わせる",
        "実践的なヒントとベストプラクティス",
        "Phase 1 (SQLクエリ) の活用場面",
        "Phase 2 (集計関数) の活用場面",
        "Phase 3 (Parquet) の活用場面",
        "Phase 4 (ビュー) の活用場面",
        "組み合わせのパターン",
        "まとめ",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
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      "source": "omicslake_comprehensive_guide.Rmd",
      "filename": "omicslake_comprehensive_guide.html",
      "title": "OmicsLake 総合ガイド",
      "author": "OmicsLake Development Team",
      "engine": "knitr::rmarkdown",
      "headings": [
        "はじめに",
        "全コードを実行する前に",
        "パッケージの主な機能",
        "1. 基本操作",
        "1.1 プロジェクトの初期化",
        "1.2 テーブルの書き込みと読み込み",
        "1.3 SQLクエリによる高度な分析 (ol_query)",
        "JOINとサブクエリ",
        "遅延評価とdplyrとの統合",
        "1.4 集計・ウィンドウ関数による高度な分析",
        "遺伝子発現統計の計算",
        "遺伝子のランキング",
        "移動平均と累積和",
        "遅延評価との組み合わせ",
        "1.5 Rオブジェクトの保存と読み込み",
        "2. 依存関係の追跡",
        "2.1 依存関係を指定してデータを保存",
        "2.2 依存関係の確認",
        "2.3 Parquet ファイルのインポート・エクスポート",
        "Parquetエクスポート",
        "Parquetインポート",
        "パフォーマンスのヒント",
        "3. バージョン管理",
        "3.1 タグ付けとラベル付け",
        "3.2 複数バージョンの作成",
        "3.3 バージョン一覧と比較",
        "3.4 特定バージョンの読み込み",
        "4. コミットと履歴管理",
        "4.1 コミットの作成",
        "4.2 履歴の確認",
        "5. 依存関係の可視化",
        "5.1 依存関係グラフの作成",
        "6. プロジェクトの復元",
        "6.1 ラベルを使った状態の復元",
        "7. 高度な機能",
        "7.1 データのフィルタリング読み込み",
        "7.2 遅延評価での読み込み",
        "7.3 テーブルの削除",
        "8. Bioconductor統合",
        "8.1 SummarizedExperimentの作成",
        "8.2 MultiAssayExperimentの作成",
        "9. 実践的なワークフロー例",
        "9.1 完全な差次発現解析ワークフロー",
        "10. まとめ",
        "主要な関数一覧",
        "プロジェクト管理",
        "データ保存・読み込み",
        "バージョン管理",
        "履歴管理",
        "依存関係",
        "一覧表示",
        "Bioconductor",
        "その他",
        "ベストプラクティス",
        "Session Information"
      ],
      "created": "2026-03-17 10:14:14",
      "modified": "2026-03-17 10:14:14",
      "commits": 1
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