{
  "_id": "6a1ee79eb401979e7341186b",
  "Package": "iSEEid",
  "Title": "iSEE extension to assist in identifying sets of samples/cells",
  "Version": "0.99.0",
  "Authors@R": "c(\nperson(\"Federico\", \"Marini\", role= c(\"aut\", \"cre\"), email = \"marinif@uni-mainz.de\", comment = c(ORCID = '0000-0003-3252-7758')),\nperson(\"Kevin\", \"Rue-Albrecht\", role = c(\"aut\"), email = \"kevinrue67@gmail.com\", comment = c(ORCID = \"0000-0003-3899-3872\")),\nperson(\"Charlotte\", \"Soneson\", role = c(\"aut\"), email = \"charlottesoneson@gmail.com\", comment = c(ORCID = '0000-0003-3833-2169')))",
  "Description": "This package provides a dedicated panel to assist the\nsample identification within a single iSEE web-application. The\nmain functionality of this package can be adopted to\nefficiently select samples (e.g. cells) that need to be\nidentified and annotated in the analysis workflow. With iSEEid,\nthe iSEE framework fully qualifies to be an ideal companion for\nassigning appropriate labels to large omics datasets.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "URL": "https://github.com/iSEE/iSEEid",
  "BugReports": "https://github.com/iSEE/iSEEid/issues",
  "VignetteBuilder": "knitr",
  "biocViews": "CellBasedAssays, Clustering, DimensionReduction,\nFeatureExtraction, GeneExpression, GUI, ImmunoOncology,\nShinyApps, SingleCell, Transcription, Transcriptomics,\nVisualization",
  "Config/testthat/edition": "3",
  "Config/roxygen2/version": "8.0.0",
  "Config/pak/sysreqs": "cmake libglpk-dev make libpng-dev libuv1-dev\nlibxml2-dev perl zlib1g-dev",
  "Repository": "https://biocstaging.r-universe.dev",
  "Date/Publication": "2026-05-19 14:06:01 UTC",
  "RemoteUrl": "https://github.com/BiocStaging/iSEEid",
  "RemoteRef": "HEAD",
  "RemoteSha": "f1c7641e39f11d7a173df1e0ce1930df7e825a09",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-19 17:03:44 UTC",
    "User": "root"
  },
  "Author": "Federico Marini [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-3252-7758>),\nKevin Rue-Albrecht [aut] (ORCID:\n<https://orcid.org/0000-0003-3899-3872>),\nCharlotte Soneson [aut] (ORCID:\n<https://orcid.org/0000-0003-3833-2169>)",
  "Maintainer": "Federico Marini <marinif@uni-mainz.de>",
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  "_user": "biocstaging",
  "_type": "src",
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  "_created": "2026-05-19T17:03:44.000Z",
  "_published": "2026-06-04T19:31:43.620Z",
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    "warning": 0,
    "note": 4
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    "author": "Federico Marini <marinif@uni-mainz.de>",
    "committer": "Federico Marini <marinif@uni-mainz.de>",
    "message": "updated news\n",
    "time": 1779199561
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    "name": "Federico Marini",
    "email": "marinif@uni-mainz.de",
    "login": "federicomarini",
    "bluesky": "@federicomarini.bsky.social",
    "linkedin": "in/federico-marini",
    "orcid": "0000-0003-3252-7758",
    "twitter": "@FedeBioinfo",
    "description": "Virchow Fellow, Bioinformatician @ Institute of Medical Biostatistics, Epidemiology and Informatics, Mainz (@imbeimainz)",
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  "_registered": true,
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      "package": "iSEE",
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  "_owner": "biocstaging",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-21",
      "n": 3
    }
  ],
  "_tags": [],
  "_topics": [
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    "clustering",
    "dimensionreduction",
    "featureextraction",
    "geneexpression",
    "gui",
    "immunooncology",
    "shinyapps",
    "singlecell",
    "transcription",
    "transcriptomics",
    "visualization"
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  "_stars": 0,
  "_contributors": [
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      "count": 60,
      "uuid": 7447478
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    "type": "organization",
    "name": "BiocStaging"
  },
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/iSEEid"
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  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/iSEEid.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
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    ".defineDataInterface",
    ".defineOutput",
    ".definePanelTour",
    ".fullName",
    ".generateOutput",
    ".hideInterface",
    ".multiSelectionResponsive",
    ".panelColor",
    ".renderOutput",
    "initialize",
    "SampleIdentificationCenter"
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    {
      "page": "SampleIdentificationCenter-class",
      "title": "The SampleIdentificationCenter class",
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        ".createObservers,SampleIdentificationCenter-method",
        ".defineDataInterface,SampleIdentificationCenter-method",
        ".defineOutput,SampleIdentificationCenter-method",
        ".definePanelTour,SampleIdentificationCenter-method",
        ".fullName,SampleIdentificationCenter-method",
        ".generateOutput,SampleIdentificationCenter-method",
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        ".multiSelectionResponsive,SampleIdentificationCenter-method",
        ".panelColor,SampleIdentificationCenter-method",
        ".renderOutput,SampleIdentificationCenter-method",
        "initialize,SampleIdentificationCenter-method",
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        "Customizing the initial state for efficient annotation",
        "Session info",
        "Bibliography"
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      "created": "2024-09-02 15:35:17",
      "modified": "2026-05-19 14:03:46",
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