{
  "_id": "6a3431183efcd9bda43c158a",
  "Package": "pepitope",
  "Title": "Extract, QC and Screen Peptide Epitopes",
  "Version": "0.99.2",
  "Authors@R": "c(\nperson('Michael', 'Schubert', email='mschu.dev@gmail.com',\nrole = c('aut', 'cre'),\ncomment = c(ORCID='0000-0002-6862-5221'))\n)",
  "Description": "Supports T cell receptor neoantigen co-culture screen\nanalysis from peptide library design to sequencing quality\ncontrol and differential abundance testing. The package\nannotates somatic variants and RNA fusions, extracts mutant and\nreference peptide context, prepares barcoded minigene construct\ntables, counts sample and construct barcodes from sequencing\ndata, and identifies immunogenic epitopes in dropout screens.",
  "URL": "https://github.com/mschubert/pepitope",
  "BugReports": "https://github.com/mschubert/pepitope/issues",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "biocViews": "DNASeq, VariantAnnotation, ImmunoOncology",
  "VignetteBuilder": "knitr",
  "Config/roxygen2/version": "8.0.0",
  "Config/pak/sysreqs": "make libbz2-dev libicu-dev liblzma-dev libpng-dev\nlibxml2-dev libssl-dev libx11-dev xz-utils zlib1g-dev",
  "Repository": "https://biocstaging.r-universe.dev",
  "Date/Publication": "2026-06-18 17:26:59 UTC",
  "RemoteUrl": "https://github.com/BiocStaging/pepitope",
  "RemoteRef": "HEAD",
  "RemoteSha": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-18 17:36:42 UTC",
    "User": "root"
  },
  "Author": "Michael Schubert [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-6862-5221>)",
  "Maintainer": "Michael Schubert <mschu.dev@gmail.com>",
  "MD5sum": "a32245c1fe74c75ac762e11c575740af",
  "_user": "biocstaging",
  "_type": "src",
  "_file": "pepitope_0.99.2.tar.gz",
  "_fileid": "07b2f03873570b79c98b8dd7b6761f0dedf9e837b18852847a85861a57e8613d",
  "_filesize": 758775,
  "_sha256": "07b2f03873570b79c98b8dd7b6761f0dedf9e837b18852847a85861a57e8613d",
  "_created": "2026-06-18T17:36:42.000Z",
  "_published": "2026-06-18T17:55:36.316Z",
  "_jobs": [
    {
      "job": 82195061521,
      "time": 338,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7731276284"
    },
    {
      "job": 82195061591,
      "time": 599,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7731374372"
    },
    {
      "job": 82195061550,
      "time": 634,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7731386887"
    },
    {
      "job": 82195061620,
      "time": 565,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7731362160"
    },
    {
      "job": 82195061614,
      "time": 611,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7731377954"
    },
    {
      "job": 82195061572,
      "time": 433,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7731311440"
    },
    {
      "job": 82195061609,
      "time": 1047,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7731542148"
    },
    {
      "job": 82195061607,
      "time": 469,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7731322760"
    },
    {
      "job": 82195061568,
      "time": 1033,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7731537064"
    },
    {
      "job": 82193181093,
      "time": 577,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7731147748"
    },
    {
      "job": 82195061500,
      "time": 286,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7731257278"
    },
    {
      "job": 82195061577,
      "time": 672,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7731400608"
    },
    {
      "job": 82195061596,
      "time": 672,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7731402573"
    },
    {
      "job": 82195061564,
      "time": 599,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7731373486"
    }
  ],
  "_bioccheck": {
    "error": 0,
    "warning": 0,
    "note": 13
  },
  "_buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/BiocStaging/pepitope",
  "_commit": {
    "id": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
    "author": "Michael Schubert <mschu.dev@gmail.com>",
    "committer": "Michael Schubert <mschu.dev@gmail.com>",
    "message": "BioC version bump\n",
    "time": 1781803619
  },
  "_maintainer": {
    "name": "Michael Schubert",
    "email": "mschu.dev@gmail.com",
    "login": "mschubert",
    "orcid": "0000-0002-6862-5221",
    "twitter": "@_ms03",
    "description": "Bioinformatics at the Medical University of Innsbruck. Previously at the Netherlands Cancer Institute (NKI), PhD from EMBL-EBI/Cambridge Uni.",
    "uuid": 442360
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.5.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Biobase",
      "role": "Imports"
    },
    {
      "package": "BiocGenerics",
      "role": "Imports"
    },
    {
      "package": "Biostrings",
      "role": "Imports"
    },
    {
      "package": "BSgenome",
      "role": "Imports"
    },
    {
      "package": "DESeq2",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "ensembldb",
      "role": "Imports"
    },
    {
      "package": "GenomeInfoDb",
      "role": "Imports"
    },
    {
      "package": "GenomicFeatures",
      "role": "Imports"
    },
    {
      "package": "GenomicRanges",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "ggpp",
      "role": "Imports"
    },
    {
      "package": "ggrepel",
      "role": "Imports"
    },
    {
      "package": "grDevices",
      "role": "Imports"
    },
    {
      "package": "gtools",
      "role": "Imports"
    },
    {
      "package": "IRanges",
      "role": "Imports"
    },
    {
      "package": "MatrixGenerics",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "patchwork",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "RColorBrewer",
      "role": "Imports"
    },
    {
      "package": "readr",
      "role": "Imports"
    },
    {
      "package": "reshape2",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "S4Vectors",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "stringdist",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "SummarizedExperiment",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "VariantAnnotation",
      "role": "Imports"
    },
    {
      "package": "XVector",
      "role": "Imports"
    },
    {
      "package": "AnnotationHub",
      "role": "Suggests"
    },
    {
      "package": "BiocCheck",
      "role": "Suggests"
    },
    {
      "package": "BSgenome.Hsapiens.NCBI.GRCh38",
      "role": "Suggests"
    },
    {
      "package": "BSgenome.Hsapiens.UCSC.hg38",
      "role": "Suggests"
    },
    {
      "package": "DT",
      "role": "Suggests"
    },
    {
      "package": "htmltools",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "pkgdown",
      "role": "Suggests"
    },
    {
      "package": "plotly",
      "role": "Suggests"
    },
    {
      "package": "readxl",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "writexl",
      "role": "Suggests"
    }
  ],
  "_owner": "biocstaging",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-25",
      "n": 2
    },
    {
      "week": "2025-29",
      "n": 13
    },
    {
      "week": "2025-30",
      "n": 6
    },
    {
      "week": "2025-31",
      "n": 3
    },
    {
      "week": "2025-34",
      "n": 6
    },
    {
      "week": "2025-35",
      "n": 4
    },
    {
      "week": "2025-38",
      "n": 2
    },
    {
      "week": "2026-01",
      "n": 3
    },
    {
      "week": "2026-03",
      "n": 3
    },
    {
      "week": "2026-21",
      "n": 1
    },
    {
      "week": "2026-22",
      "n": 28
    },
    {
      "week": "2026-24",
      "n": 14
    },
    {
      "week": "2026-25",
      "n": 5
    }
  ],
  "_tags": [],
  "_topics": [
    "dnaseq",
    "variantannotation",
    "immunooncology",
    "zlib",
    "cpp"
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "mschubert",
      "count": 354,
      "uuid": 442360
    }
  ],
  "_userbio": {
    "uuid": 278472782,
    "type": "organization",
    "name": "BiocStaging",
    "followers": 0
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/pepitope"
  },
  "_devurl": "https://github.com/mschubert/pepitope",
  "_searchresults": 4,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/pepitope.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "annotate_coding",
    "annotate_fusions",
    "assay",
    "colData",
    "count_fastq",
    "example_barcodes",
    "example_fastq",
    "example_peptides",
    "filter_fusions",
    "filter_variants",
    "genome",
    "make_peptides",
    "make_report",
    "pep_tile",
    "plot_barcode_overlap",
    "plot_distr",
    "plot_read_count",
    "plot_read_distr",
    "plot_read_structure",
    "plot_reads",
    "plot_screen",
    "readVcfAsVRanges",
    "remove_cutsite",
    "rowData",
    "screen_calc",
    "seqinfo",
    "seqlevels",
    "seqlevelsStyle",
    "seqlevelsStyle<-",
    "subset_context",
    "subset_context_fusion"
  ],
  "_help": [
    {
      "page": "annotate_coding",
      "title": "Annotate VCF variants with coding changes",
      "topics": [
        "annotate_coding"
      ]
    },
    {
      "page": "annotate_fusions",
      "title": "Aggregate fusion VCFs into a table",
      "topics": [
        "annotate_fusions"
      ]
    },
    {
      "page": "count_fastq",
      "title": "Count barcodes directly from source FASTQ files",
      "topics": [
        "count_fastq"
      ]
    },
    {
      "page": "filter_fusions",
      "title": "Filter a fusion VRanges object by number of reads and tools",
      "topics": [
        "filter_fusions"
      ]
    },
    {
      "page": "filter_variants",
      "title": "Make results report to save as xlsx sheets (full, filtered, peptides)",
      "topics": [
        "filter_variants"
      ]
    },
    {
      "page": "make_peptides",
      "title": "Make a variants report as named list of tables",
      "topics": [
        "make_peptides"
      ]
    },
    {
      "page": "make_report",
      "title": "Make a variants report as named list of tables",
      "topics": [
        "make_report"
      ]
    },
    {
      "page": "pep_tile",
      "title": "Tile cDNA into peptide sequences",
      "topics": [
        "pep_tile"
      ]
    },
    {
      "page": "pepitope",
      "title": "Pepitope: peptide epitopes from reference genome and variant (VCF) file",
      "topics": [
        "pepitope-package",
        "pepitope"
      ]
    },
    {
      "page": "plot_barcode_overlap",
      "title": "Plot barcode overlap between different samples",
      "topics": [
        "plot_barcode_overlap"
      ]
    },
    {
      "page": "plot_read_count",
      "title": "Plot the overall read counts",
      "topics": [
        "plot_reads",
        "plot_read_count"
      ]
    },
    {
      "page": "plot_read_distr",
      "title": "Plot the read distribution across barcodes",
      "topics": [
        "plot_distr",
        "plot_read_distr"
      ]
    },
    {
      "page": "plot_read_structure",
      "title": "Plot annotated read structure examples",
      "topics": [
        "plot_read_structure"
      ]
    },
    {
      "page": "plot_screen",
      "title": "Plot screen results",
      "topics": [
        "plot_screen"
      ]
    },
    {
      "page": "remove_cutsite",
      "title": "Remove a Restriction Enzyme cut site but keep AA in a tiled peptide data.frame",
      "topics": [
        "remove_cutsite"
      ]
    },
    {
      "page": "screen_calc",
      "title": "Calculate differential abundance of construct barcodes",
      "topics": [
        "screen_calc"
      ]
    },
    {
      "page": "subset_context",
      "title": "Subset nucleotide/protein sequences to codon +/- 45 bp context",
      "topics": [
        "subset_context"
      ]
    },
    {
      "page": "subset_context_fusion",
      "title": "Subset the peptide context for gene fusions",
      "topics": [
        "subset_context_fusion"
      ]
    }
  ],
  "_readme": "https://github.com/BiocStaging/pepitope/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "AnnotationDbi",
    "AnnotationFilter",
    "askpass",
    "BH",
    "Biobase",
    "BiocBaseUtils",
    "BiocGenerics",
    "BiocIO",
    "BiocParallel",
    "Biostrings",
    "bit",
    "bit64",
    "bitops",
    "blob",
    "BSgenome",
    "cachem",
    "cigarillo",
    "cli",
    "clipr",
    "codetools",
    "cpp11",
    "crayon",
    "curl",
    "DBI",
    "DelayedArray",
    "DESeq2",
    "dplyr",
    "ensembldb",
    "farver",
    "fastmap",
    "formatR",
    "futile.logger",
    "futile.options",
    "generics",
    "GenomeInfoDb",
    "GenomicAlignments",
    "GenomicFeatures",
    "GenomicRanges",
    "ggplot2",
    "ggpp",
    "ggrepel",
    "glue",
    "gridExtra",
    "gtable",
    "gtools",
    "hms",
    "httr",
    "IRanges",
    "isoband",
    "jsonlite",
    "KEGGREST",
    "labeling",
    "lambda.r",
    "lattice",
    "lazyeval",
    "lifecycle",
    "locfit",
    "lubridate",
    "magrittr",
    "MASS",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "memoise",
    "mime",
    "openssl",
    "patchwork",
    "pillar",
    "pkgconfig",
    "plyr",
    "png",
    "polynom",
    "prettyunits",
    "progress",
    "ProtGenerics",
    "purrr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RCurl",
    "readr",
    "reshape2",
    "restfulr",
    "Rhtslib",
    "rjson",
    "rlang",
    "Rsamtools",
    "RSQLite",
    "rtracklayer",
    "S4Arrays",
    "S4Vectors",
    "S7",
    "scales",
    "Seqinfo",
    "snow",
    "SparseArray",
    "stringdist",
    "stringi",
    "stringr",
    "SummarizedExperiment",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "tzdb",
    "UCSC.utils",
    "utf8",
    "VariantAnnotation",
    "vctrs",
    "viridisLite",
    "vroom",
    "withr",
    "XML",
    "xts",
    "XVector",
    "yaml",
    "zoo"
  ],
  "_sysdeps": [
    {
      "shlib": "libz",
      "package": "zlib1g",
      "headers": "zlib1g-dev",
      "source": "zlib",
      "version": "1:1.3.dfsg-3.1ubuntu2.1",
      "name": "zlib",
      "homepage": "http://zlib.net/",
      "description": "compression library - runtime"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "screen.Rmd",
      "filename": "screen.html",
      "title": "Co-culture screen",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Preparation",
        "Calculating differential abundance",
        "Plotting the screen results"
      ],
      "created": "2025-03-06 15:19:49",
      "modified": "2026-06-18 17:26:41",
      "commits": 11
    },
    {
      "source": "minigene.Rmd",
      "filename": "minigene.html",
      "title": "Minigene report",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Preparation",
        "Selecting the right reference genome",
        "Adding RNA expression",
        "SNPs and small indels",
        "Reading and filtering mutations",
        "Annotating and subsetting expressed variants",
        "Fusion genes from RNA-seq",
        "Reading a fusion VCF",
        "Annotating fusion genes",
        "Generating the Minigene Library",
        "Tiling cDNAs of interest into smaller peptides",
        "Saving the report file"
      ],
      "created": "2025-08-02 11:05:09",
      "modified": "2025-08-02 11:05:09",
      "commits": 1
    },
    {
      "source": "qc.Rmd",
      "filename": "qc.html",
      "title": "Quality control",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Preparation",
        "Barcoded construct tables",
        "Creating a sample sheet",
        "Read structure and counting",
        "Read structure definition",
        "Counting sample and construct barcodes",
        "Quality Control plots",
        "Plotting total barcode counts",
        "Representation of individual barcodes"
      ],
      "created": "2025-03-06 15:19:49",
      "modified": "2026-06-18 17:26:41",
      "commits": 35
    }
  ],
  "_score": 4.290034611362518,
  "_indexed": true,
  "_nocasepkg": "pepitope",
  "_universes": [
    "biocstaging",
    "mschubert"
  ],
  "_previous": "0.99.1",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.99.2",
      "date": "2026-06-18T17:42:30.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "9c72a1b24a8694e3dd0803bf4a65fdb6a909962880e824e1581526007946fe78",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.99.2",
      "date": "2026-06-18T17:42:18.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "26ed02f85367013cef682b24e159fb6973fa7c75d07bc9fff304fe5fd088d2ae",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.99.2",
      "date": "2026-06-18T17:41:58.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "d204b9d70fbb8e1304fce4923cb587ea1550a6743f05e4a02005b5555c26d573",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.99.2",
      "date": "2026-06-18T17:42:08.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "216a63e2b28fa9c26d93fd62ab3f106b8d64de0e6c4c04e1120ca9b8df998177",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.99.2",
      "date": "2026-06-18T17:40:27.000Z",
      "arch": "aarch64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "ec735b104670f8fa896812f8dff259bb1890a7b2ad7dd473bb4087586526869e",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.99.2",
      "date": "2026-06-18T17:44:25.000Z",
      "arch": "x86_64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "f69052e4a7390979a8cd8a13f97d21fd4d0d108c941694befcf605d8ed9d39c6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.99.2",
      "date": "2026-06-18T17:40:43.000Z",
      "arch": "aarch64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "4d53de1d9f8e41463b8b3c39a8118f151dc03eb9c838e23361135b5080bf4796",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.99.2",
      "date": "2026-06-18T17:45:04.000Z",
      "arch": "x86_64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "e1da3fccb8bac5c53dab1bf54ec474b208fdf48a1efe76c0b9e30af23ca5cc4d",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.99.2",
      "date": "2026-06-18T17:42:18.000Z",
      "arch": "emscripten",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "7eecba3b7ecc1a2e12b67d37150f3c58efa9cd96c2031802b5995fd57405df56",
      "status": "success",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.99.2",
      "date": "2026-06-18T17:40:54.000Z",
      "arch": "x86_64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "ae55383508db7cd535539c5d783ff30186e44242f56ec5e8a8626b9596bc8381",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.99.2",
      "date": "2026-06-18T17:41:58.000Z",
      "arch": "x86_64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "e07bea147aa45320b5ec3352f0230cbaedb711879890c2f1081d2730bba680dd",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.99.2",
      "date": "2026-06-18T17:40:26.000Z",
      "arch": "x86_64",
      "commit": "0146b1ec6ca0fa8828e66acd41610bfadd6e4b1e",
      "fileid": "c43db380f332c842f7680aea1b7ef49237587d81f02c2d57274c463be8cdbd18",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/biocstaging/actions/runs/27777429238"
    }
  ]
}