{
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  "Type": "Package",
  "Title": "Test for Spatial Bivariate Association Across Omics Types",
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  "Authors@R": "c(person(given = \"Stijn\", family = \"Hawinkel\", \nemail = \"stijn.hawinkel@psb.ugent.be\",\nrole=c(\"cre\", \"aut\"), comment = c(ORCID = \"0000-0002-4501-5180\")),\nperson(given = \"Wangjun\", family = \"Hu\",\nrole=c(\"aut\")))",
  "Description": "The sbivar package implements a suite of tests for Spatial\nBIVARiate association across omics modalities, with possibly\ndisjoint coordinate sets. Implemented tests are generalized\nadditive models (GAMs), modified t-test, bivariate Moran's I\nand Gaussian processes (GPs). Both single images and replicated\nexperiments can be analysed.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "RdMacros": "Rdpack",
  "biocViews": "Transcriptomics, Spatial, Proteomics, Metabolomics",
  "VignetteBuilder": "knitr",
  "BugReports": "https://github.com/sthawinke/sbivar/issues",
  "URL": "https://github.com/sthawinke/sbivar",
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  "Repository": "https://biocstaging.r-universe.dev",
  "Date/Publication": "2026-06-09 15:10:08 UTC",
  "RemoteUrl": "https://github.com/BiocStaging/sbivar",
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  "Author": "Stijn Hawinkel [cre, aut] (ORCID:\n<https://orcid.org/0000-0002-4501-5180>),\nWangjun Hu [aut]",
  "Maintainer": "Stijn Hawinkel <stijn.hawinkel@psb.ugent.be>",
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      "topics": [
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    {
      "page": "ModTtestSingle",
      "title": "Perform modified t-tests for all pairs",
      "topics": [
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      "page": "MoransIMulti",
      "title": "Find all Moran's I statistics for a list of matrices",
      "topics": [
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    {
      "page": "MoransISingle",
      "title": "Calculate bivariate Moran's I between two modality matrix, with variance and p-value",
      "topics": [
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      "page": "moveTwoCoords",
      "title": "Move two sets of coordinates to 0-1. without shifting them with respect to each other",
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      "page": "normMat",
      "title": "Normalize a data matrix, and ensure correct column names",
      "topics": [
        "normMat"
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    },
    {
      "page": "plotCoords",
      "title": "Plot the coordinates of two omics modalities",
      "topics": [
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        "plotCoordsMulti"
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    },
    {
      "page": "plotGAMs",
      "title": "Plot the fitted splines, and the correlation between them",
      "topics": [
        "plotGAMs",
        "plotGAMsTopResults"
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    },
    {
      "page": "plotTopPair",
      "title": "Plot a feature pair",
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        "plotPairSingle",
        "plotPairSingleVectors",
        "plotTopPair"
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      "title": "Print feature progress",
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      "page": "sbivar",
      "title": "Spatial bivariate association analysis",
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        "sbivar,list-method",
        "sbivar,matrix-method",
        "sbivar,MultiAssayExperiment-method",
        "sbivar,SpatialExperiment-method"
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      "page": "sbivarMulti",
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    {
      "page": "sbivarSingle",
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