Package: cellchatr
Title: Fast Ligand-Receptor Interaction Screening for Single-Cell Data
        Using Rust
Version: 0.99.1
Authors@R: 
    person("Mayank", "Gandhi", , "135.mayankgandhi@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0009-0000-3448-9308"))
Description: Fast identification of over-expressed genes and
        ligand-receptor interactions in single-cell RNA-seq data, the
        pre-processing steps of cell-cell communication analysis tools
        such as CellChat. Works directly on SummarizedExperiment and
        SingleCellExperiment objects and accepts any ligand-receptor
        table (for example the CellChatDB interaction table). The
        per-gene, per-cell-group Wilcoxon rank-sum tests are
        implemented in Rust via extendr and run in parallel with Rayon.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Config/rextendr/version: 0.4.2
SystemRequirements: Cargo (Rust's package manager), rustc >= 1.65.0, xz
URL: https://github.com/mayankgandhi13/cellchatr
BugReports: https://github.com/mayankgandhi13/cellchatr/issues
biocViews: SingleCell, GeneExpression, Transcriptomics,
        DifferentialExpression, Network, Software
Depends: R (>= 4.4.0)
Imports: methods, S4Vectors, SummarizedExperiment
Suggests: SingleCellExperiment, Matrix, BiocStyle, knitr, rmarkdown,
        testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: xz-utils zlib1g-dev libclang-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-10-01 01:52:36 UTC
RemoteUrl: https://github.com/BiocStaging/cellchatr
RemoteRef: HEAD
RemoteSha: e315f0b33c2c95e25ae60f30a82488972986578c
NeedsCompilation: yes
Packaged: 2026-10-01 06:17:06 UTC; root
Author: Mayank Gandhi [aut, cre] (ORCID:
    <https://orcid.org/0009-0000-3448-9308>)
Maintainer: Mayank Gandhi <135.mayankgandhi@gmail.com>