Package: cpgdirectionData
Type: Package
Title: Data Layers for the cpgdirection Package (ExperimentHub)
Version: 0.99.1
Authors@R: c(
    person("Tsachi", "Ein-Dor", email = "teindor@runi.ac.il",
           role = c("aut", "cre", "fnd"),
           comment = c(ORCID = "0000-0002-3078-7591")))
Description: ExperimentHub companion to the cpgdirection package.
        Serves the eight data layers too large to ship inside a
        Bioconductor software package: the three tissue catalogue
        lookup tables (blood, nasal epithelium, solid tissue; hg19),
        the SMR causal-direction table, the EPIC v2 hg19 probe
        positions, the brain SMR directions, the genome-wide saliva
        bridge scores, and the multi-source EPIC v2 probe-to-gene
        annotation (five cross-validated annotation tracks with
        per-track support flags). Each resource is a serialized
        data.frame retrieved from ExperimentHub on first use and cached
        locally thereafter. The cpgdirection package consumes these
        resources transparently; direct use is possible through the
        accessors documented here.
License: MIT + file LICENSE
Encoding: UTF-8
Depends: R (>= 4.5.0), ExperimentHub
Imports: AnnotationHub
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, cpgdirection
VignetteBuilder: knitr
biocViews: ExperimentData, ExperimentHub, Homo_sapiens_Data,
        MicroarrayData, MethylationArrayData, TissueMicroarrayData,
        Tissue, Genome
URL: https://github.com/teindor/cpgdirection,
        https://doi.org/10.5281/zenodo.22225164
BugReports: https://github.com/teindor/cpgdirection/issues
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: libicu-dev libpng-dev libssl-dev zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-09-01 06:40:16 UTC
RemoteUrl: https://github.com/BiocStaging/cpgdirectionData
RemoteRef: HEAD
RemoteSha: 5058dbc48ef5eba72e77e29dce8ed900871a1be0
NeedsCompilation: no
Packaged: 2026-10-01 12:23:05 UTC; root
Author: Tsachi Ein-Dor [aut, cre, fnd] (ORCID:
    <https://orcid.org/0000-0002-3078-7591>)
Maintainer: Tsachi Ein-Dor <teindor@runi.ac.il>