Package: drugannotR
Type: Package
Title: Coordinate-Level Pharmacological Annotation of Genomic Regions
Version: 0.99.0
Authors@R: c(
    person(
        given = "Vasileios",
        family = "Lemonidis",
        role    = c("aut", "cre", "cph"),
        email   = "vasileios.lemonidis@uantwerpen.be",
        comment = c(ORCID = "0000-0002-6446-3536")
    ),    
    person("Center for Oncological Research, University of Antwerp",
           role = c("cph", "fnd")),
    person("Department of Human Genetics, KU Leuven",
           role = c("cph", "fnd")),
    person("Stichting Tegen Kanker",
           role = "fnd"))
Description: Maps genomic regions to gene features and then to
        traceable drug-gene relationships. The package preserves
        genomic coordinates, relationship categories, evidence scope,
        and source provenance. It deliberately reports coordinate-level
        pharmacological relevance rather than predicting treatment
        response, efficacy, toxicity, or dose.
License: BSD_3_clause + file LICENSE
Encoding: UTF-8
Depends: R (>= 4.5.0)
Imports: AnnotationDbi, BiocFileCache, GenomeInfoDb, GenomicFeatures,
        GenomicRanges, IRanges, S4Vectors, methods, rtracklayer, stats,
        utils
Suggests: BiocStyle, covr, knitr, org.Hs.eg.db, rmarkdown, testthat (>=
        3.0.0), txdbmaker, TxDb.Hsapiens.UCSC.hg19.knownGene,
        TxDb.Hsapiens.UCSC.hg38.knownGene
VignetteBuilder: knitr
biocViews: Annotation, DataRepresentation, DataImport, GeneTarget,
        GenomeAnnotation, Pharmacogenetics, Pharmacogenomics,
        VariantAnnotation
Roxygen: list(markdown = TRUE)
RoxygenNote: 8.0.0
Config/testthat/edition: 3
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-07-31 09:49:32 UTC
RemoteUrl: https://github.com/BiocStaging/drugannotR
RemoteRef: HEAD
RemoteSha: cdff92230f7f31837ccc17f57ca7faf3fa38038e
NeedsCompilation: no
Packaged: 2026-09-29 10:53:04 UTC; root
Author: Vasileios Lemonidis [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0002-6446-3536>),
  Center for Oncological Research, University of Antwerp [cph, fnd],
  Department of Human Genetics, KU Leuven [cph, fnd],
  Stichting Tegen Kanker [fnd]
Maintainer: Vasileios Lemonidis <vasileios.lemonidis@uantwerpen.be>