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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "lantern" in publications use:'
type: software
license: MIT
title: 'lantern: Ancestry-Specific Rare Variant Association Analysis'
version: 0.99.0
abstract: Ancestry-specific rare variant burden testing for admixed populations. Splits
  genotype dosages by local ancestry (as inferred by 'RFMix') into per-ancestry dosages,
  using either phased haplotypes or unphased genotypes with shrinkage toward global
  ancestry, and writes them to 'SeqArray' GDS files. Ancestry-stratified gene-level
  tests are then run with the 'SMMAT' framework of Chen et al. (2019) <https://doi.org/10.1016/j.ajhg.2018.12.012>
  as implemented in 'GMMAT', and the per-ancestry p-values are combined with the Cauchy
  combination test of Liu and Xie (2020) <https://doi.org/10.1080/01621459.2018.1554485>.
authors:
- family-names: Wang
  given-names: Yu
  email: ywang@mcw.com
- family-names: Tuftin
  given-names: Bjoernar
  email: btuftin@email.unc.edu
- family-names: Auer
  given-names: Paul
  email: pauer@mcw.edu
repository: https://biocstaging.r-universe.dev
repository-code: https://github.com/yuw444/lantern
commit: fd0703b3db6b95aa7f1c2252b44981d70f423f2f
url: https://yuw444.github.io/lantern/
date-released: '2026-10-06'
contact:
- family-names: Wang
  given-names: Yu
  email: ywang@mcw.com