mesa underpins the analysis in two published papers. Please cite whichever is applicable to your work.

Chemi F, Pearce SP, Clipson A, Hill SM, Conway A, Richardson SA, Kamieniecka K, Caeser R, White DJ, Mohan S, Foy V, Simpson KL, Galvin M, Frese KK, Priest L, Egger J, Kerr A, Massion PP, Poirier JT, Brady G, Blackhall F, Rothwell DG, Rudin CM, Dive C (2022). “cfDNA methylome profiling for detection and subtyping of small cell lung cancers.” Nature Cancer, 3(10), 1260–1270. doi:10.1038/s43018-022-00415-9.

Conway A, Pearce SP, Clipson A, Hill SM, Chemi F, Slane-Tan D, Ferdous S, Hossain ASMM, Kamieniecka K, White DJ, Mitchell C, Kerr A, Krebs MG, Brady G, Dive C, Cook N, Rothwell DG (2024). “A cfDNA methylation-based tissue-of-origin classifier for cancers of unknown primary.” Nature Communications, 15, 3292. doi:10.1038/s41467-024-47195-7.

Corresponding BibTeX entries:

  @Article{Chemi2022,
    title = {cfDNA methylome profiling for detection and subtyping of
      small cell lung cancers},
    author = {Francesca Chemi and Simon P. Pearce and Alexandra Clipson
      and Steven M. Hill and Alicia-Marie Conway and Sophie A.
      Richardson and Katarzyna Kamieniecka and Rebecca Caeser and
      Daniel J. White and Sumitra Mohan and Victoria Foy and Kathryn L.
      Simpson and Melanie Galvin and Kristopher K. Frese and Lynsey
      Priest and Jacklynn Egger and Alastair Kerr and Pierre P. Massion
      and John T. Poirier and Gerard Brady and Fiona Blackhall and
      Dominic G. Rothwell and Charles M. Rudin and Caroline Dive},
    journal = {Nature Cancer},
    year = {2022},
    volume = {3},
    number = {10},
    pages = {1260--1270},
    doi = {10.1038/s43018-022-00415-9},
  }

  @Article{Conway2024,
    title = {A cfDNA methylation-based tissue-of-origin classifier for
      cancers of unknown primary},
    author = {Alicia-Marie Conway and Simon P. Pearce and Alexandra
      Clipson and Steven M. Hill and Francesca Chemi and Dan Slane-Tan
      and Saba Ferdous and A. S. Md Mukarram Hossain and Katarzyna
      Kamieniecka and Daniel J. White and Claire Mitchell and Alastair
      Kerr and Matthew G. Krebs and Gerard Brady and Caroline Dive and
      Natalie Cook and Dominic G. Rothwell},
    journal = {Nature Communications},
    year = {2024},
    volume = {15},
    pages = {3292},
    doi = {10.1038/s41467-024-47195-7},
  }