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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "polyICSFlow" in publications use:'
type: software
title: 'polyICSFlow: Identifying the Frequency of Polyfunctional Antigen-Specific
  T cells in ICS Flow Cytometry Data'
version: 0.99.3
doi: 10.32614/CRAN.package.polyICSFlow
abstract: polyICSFlow systematically identifies all cytokine combinations detected
  in an intracellular cytokine staining (ICS) flow cytometry assay and quantifies
  polyfunctional antigen-specific responses to single or multiple antigens. The package
  also offers versatile plotting options for efficient data exploration and visualization
  of cytokine co-expression profiles.
authors:
- family-names: Loksø Dietz
  given-names: Lisa
  email: lisdie@clin.au.dk
  orcid: https://orcid.org/0000-0002-1797-5766
- family-names: Van Gassen
  given-names: Sofie
  email: sofie.vangassen@ugent.be
  orcid: https://orcid.org/0000-0002-7119-5330
- family-names: Bonte
  given-names: Sarah
  email: sarahm.bonte@ugent.be
  orcid: https://orcid.org/0000-0002-0637-4893
- family-names: Saeys
  given-names: Yvan
  email: yvan.saeys@ugent.be
  orcid: https://orcid.org/0000-0002-0415-1506
- family-names: Schmeltz Søgaard
  given-names: Ole
  email: ole.schmeltz.sogaard@clin.au.dk
  orcid: https://orcid.org/0000-0001-9107-2023
repository: https://biocstaging.r-universe.dev
repository-code: https://github.com/SoegaardLab/polyICSFlow
commit: 036ed01f8651ae6c37bb63dbdc88d2cafe6cee74
url: https://github.com/SoegaardLab/polyICSFlow
date-released: '2026-06-11'
contact:
- family-names: Loksø Dietz
  given-names: Lisa
  email: lisdie@clin.au.dk
  orcid: https://orcid.org/0000-0002-1797-5766