Package: scCertify
Title: Explainable Confidence Scoring for Single-Cell Annotations
Version: 0.99.1
Authors@R: 
    person(
      "Jaya Surya",
      "Doddetipalli",
      email = "jayasuryadoddetipalli@gmail.com",
      role = c("aut", "cre"),
      comment = c(
        ORCID = "0009-0002-8975-4425"
      )
    )
Description: cellCertR provides an explainable confidence scoring
        framework for single-cell RNA sequencing annotations using
        marker enrichment, neighborhood agreement, entropy-based
        uncertainty estimation, and ontology-aware label matching.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 8.0.0
Imports: Seurat, FNN, entropy, UCell
Suggests: SingleR, celldex, SingleCellExperiment, ggplot2, knitr,
        rmarkdown, scDblFinder, testthat (>= 3.0.0)
biocViews: Software, SingleCell, RNASeq, GeneExpression, Sequencing
URL: https://github.com/Jaya-Surya-dev/scCertify
BugReports: https://github.com/Jaya-Surya-dev/scCertify/issues
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev python3 zlib1g-dev
Repository: https://biocstaging.r-universe.dev
Date/Publication: 2026-07-01 13:36:13 UTC
RemoteUrl: https://github.com/BiocStaging/scCertify
RemoteRef: HEAD
RemoteSha: 0a6e8bebd2db89047a4ae343db7192afaa926089
NeedsCompilation: no
Packaged: 2026-07-01 15:46:07 UTC; root
Author: Jaya Surya Doddetipalli [aut, cre] (ORCID:
    <https://orcid.org/0009-0002-8975-4425>)
Maintainer: Jaya Surya Doddetipalli <jayasuryadoddetipalli@gmail.com>