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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "scOverlay" in publications use:'
type: software
license: Artistic-2.0
title: 'scOverlay: Multilayer plots for single-cell data'
version: 0.99.0
abstract: scOverlay provides publication-grade plotting helpers to display a foreground
  feature (gene expression or metadata) on top of a contextual background (clusters,
  cell types, samples, or a solid colour) in the same reduced dimension panel, each
  with independent colour scales (via ggnewscale). It integrates with SingleCellExperiment
  / SummarizedExperiment, supports flexible subsetting of foreground cells, multiple
  assays (e.g. counts, logcounts), and grid arrangements by user-defined grouping
  columns.
authors:
- family-names: Gel
  given-names: Bernat
  email: bgel@igtp.cat
  orcid: https://orcid.org/0000-0001-8878-349X
repository: https://biocstaging.r-universe.dev
repository-code: https://github.com/bernatgel/scOverlay
commit: a1e68884d4f118b0d2a8fc2588aceb464fba3935
url: https://github.com/bernatgel/scOverlay
date-released: '2026-06-02'
contact:
- family-names: Gel
  given-names: Bernat
  email: bgel@igtp.cat
  orcid: https://orcid.org/0000-0001-8878-349X