---
title: "Introduction to spatialDESeq"
author: "Sahal Paladan"
date: "`r Sys.Date()`"
output: BiocStyle::html_document
vignette: >
  %\VignetteIndexEntry{Introduction to spatialDESeq}
  %\VignetteEngine{knitr::rmarkdown}
  %\VignetteEncoding{UTF-8}
---

## Complete Execution Run
```{r test_pipeline, message=FALSE}
library(spatialDESeq)
se <- make_mock_spatial()
analyzed <- spatialDESeq(se, design = ~ condition, radius = 2.5)
head(SummarizedExperiment::rowData(analyzed))
```
## Session Information
```{r session_info}
sessionInfo()
```