Package: GSE142512 0.99.2

Paul Ruiz

GSE142512: 450K and EPIC Methylation ExperimentHub Data from GEO

Provides ExperimentHub access to processed DNA methylation resources derived from GEO accession GSE142512. The resources contain Illumina HumanMethylation450 and Infinium MethylationEPIC data represented as RangedSummarizedExperiment objects with beta, M, and CN assays, hg19 genomic ranges, and sample phenotype metadata.

Authors:Paul Ruiz [aut, cre]

GSE142512_0.99.2.tar.gz
GSE142512_0.99.2.zip(r-4.7-any)GSE142512_0.99.2.zip(r-4.6-any)GSE142512_0.99.2.zip(r-4.5-any)
GSE142512_0.99.2.tgz(r-4.6-any)GSE142512_0.99.2.tgz(r-4.5-any)
GSE142512_0.99.2.tar.gz(r-4.7-any)GSE142512_0.99.2.tar.gz(r-4.6-any)
GSE142512_0.99.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
GSE142512/json (API)

# Install 'GSE142512' in R:

install.packages('GSE142512', repos = c('https://biocstaging.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/paulyrp/gse142512/issues

On CRAN:

experimentdata experimenthub geo homo_sapiens_data methylationarraydata microarraydata tissue

3.30 score 4 scripts 3 exports 57 dependencies

Last updated from:3b8630a010. Checks:1 NOTE, 9 OK. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	169
linux-devel	OK	222
source / vignettes	OK	234
linux-release	OK	245
macos-release	OK	195
macos-oldrel	OK	151
windows-devel	OK	213
windows-release	OK	165
windows-oldrel	OK	159
wasm-release	OK	134

Exports:GSE142512 GSE142512_GPL13534_450K GSE142512_GPL21145_EPIC

Dependencies:AnnotationDbi AnnotationHub askpass Biobase BiocBaseUtils BiocFileCache BiocGenerics BiocManager BiocVersion Biostrings bit bit64 blob cachem cli cpp11 crayon curl DBI dbplyr dplyr ExperimentHub fastmap filelock generics glue httr httr2 IRanges jsonlite KEGGREST lifecycle magrittr memoise mime openssl pillar pkgconfig png purrr R6 rappdirs rlang RSQLite S4Vectors Seqinfo stringi stringr sys tibble tidyr tidyselect utf8 vctrs withr XVector yaml

GSE142512 DNA methylation data

Introduction | Installation | Accessing the resources | Data availability | Session information

Rendered fromGSE142512.Rmdusingknitr::rmarkdown

Last update: 2026-09-07
Started: 2026-07-05

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
GSE142512 methylation data in ExperimentHub	GSE142512-package
Load GSE142512 ExperimentHub resources	GSE142512 GSE142512_GPL13534_450K GSE142512_GPL21145_EPIC