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  1. epiwraps::exampleDNAme
    Example DNAme data on some active gene bodies
    UnstitchedGPos
  2. epiwraps::exampleESE
    Example EnrichmentSE object
    EnrichmentSE
  3. epiwraps::geneBodies
    Example DNAme data on some active gene bodies
    GRanges
  4. fastPLS::breast
    Breast-cancer mRNA subtype example
  5. fastPLS::colon
    Colon cancer gene-expression example
  6. GPlinksR::gp_example_inputs
    Example Gene and Peak Inputs for GPlinksR
  7. GPlinksR::gp_example_links
    Example Link Table for the Packaged GPlinksR Demo Subset
  8. IntegratedLearner::FranzosaE_2019_CuratedMetabolome
    Franzosa et al. 2019 training metabolome table
  9. IntegratedLearner::FranzosaE_2019_CuratedMetadata
    Franzosa et al. 2019 training metadata
  10. IntegratedLearner::FranzosaE_2019_CuratedSpeciesProfile
    Franzosa et al. 2019 training species profile
  11. IntegratedLearner::FranzosaE_2019_Validation_CuratedMetabolome
    Franzosa et al. 2019 validation metabolome table
  12. IntegratedLearner::FranzosaE_2019_Validation_CuratedMetadata
    Franzosa et al. 2019 validation metadata
  13. IntegratedLearner::FranzosaE_2019_Validation_CuratedSpeciesProfile
    Franzosa et al. 2019 validation species profile
  14. IntegratedLearner::gene_all
    TCGA BRCA gene-level table
  15. IntegratedLearner::mir_all
    TCGA BRCA microRNA-level table
  16. IntegratedLearner::NLIBD
    NLIBD binary-outcome PCL fixture
  17. IntegratedLearner::pregnancy
    Pregnancy continuous-outcome PCL fixture
  18. IntegratedLearner::PRISM
    PRISM binary-outcome PCL fixture
  19. loopcityData::GM12878_10KbLoops
    GInteractions
  20. loopcityData::GM12878_10KbLoopsChr21
    GInteractions
  21. MetaPathNet::MetaPathNet_example_network
    Example tryptophan-related MetaPathNet network
    matrix|1769 x 3
  22. MOTL::Lrn
    Learning dataset
  23. MOTL::TL_param
    Transfer learning parameters
  24. MOTL::Trg
    Target datasets
  25. pepVet::aa_properties
    Amino acid properties
  26. reglScatterplotR::reglScatterExample
    Example single-cell UMAP embedding
  27. sbivar::Vicari
    Spatial transcriptomics and metabolomics data of mouse brain
  28. scOverlay::sce_mpnst_example
    Example MPNST SingleCellExperiment for the scOverlay vignette
    SingleCellExperiment
  29. scOverlay::sce_overlay_example
    Small example SingleCellExperiment for scOverlay
    SingleCellExperiment
  30. selexprepR::selexprep_public_catalog
    Curated public HT-SELEX catalog
    DFrame
  31. TiDEomics::example_net
    'run_WGCNA()' output object for runnable examples
  32. TiDEomics::example_obj
    SummarizedExperiment object for runnable examples
    SummarizedExperiment
  33. TiDEomics::example_res_list
    'run_Trendy' output object for runnable examples
  34. TiDEomics::tutorial_data
    Dataset for TiDEomics tutorial, expression matrix
  35. TiDEomics::tutorial_sample_info
    Dataset for TiDEomics tutorial, sample information
  36. tTEscanR::default_tTEscanR_metadata
    Metadata of mRNA and tRNA data
  37. tTEscanR::default_tTEscanR_mRNA_data
    mRNA Expression Data Subset
  38. tTEscanR::default_tTEscanR_tRNA_data
    tRNA Expression Data Subset
    matrix|100 x 89
  39. woven::woven_example
    Example dataset for WOVEN