Package: GSE280465 0.99.0
GSE280465: GSE280465 EPICv2 Methylation ExperimentHub Data
Provides ExperimentHub access to a processed DNA methylation resource derived from GEO accession GSE280465. The resource contains adult Illumina Infinium MethylationEPIC version 2 data from 163 samples across four tissue types, represented as a RangedSummarizedExperiment with beta, M, and CN assays, hg38 genomic ranges, and sample phenotype metadata.
Authors:
GSE280465_0.99.0.tar.gz
GSE280465_0.99.0.zip(r-4.7)GSE280465_0.99.0.zip(r-4.6)GSE280465_0.99.0.zip(r-4.5)
GSE280465_0.99.0.tgz(r-4.6-any)GSE280465_0.99.0.tgz(r-4.5-any)
GSE280465_0.99.0.tar.gz(r-4.7-any)GSE280465_0.99.0.tar.gz(r-4.6-any)
GSE280465_0.99.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
GSE280465/json (API)
| # Install 'GSE280465' in R: |
| install.packages('GSE280465', repos = c('https://biocstaging.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/paulyrp/gse280465/issues
experimentdataexperimenthubgeohomo_sapiens_datamethylationarraydatamicroarraydatatissue
Last updated from:bc25256118. Checks:1 NOTE, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | NOTE | 223 | ||
| linux-devel-x86_64 | OK | 234 | ||
| source / vignettes | OK | 229 | ||
| linux-release-x86_64 | OK | 221 | ||
| macos-release-arm64 | OK | 142 | ||
| macos-oldrel-arm64 | OK | 189 | ||
| windows-devel | OK | 160 | ||
| windows-release | OK | 163 | ||
| windows-oldrel | OK | 153 | ||
| wasm-release | OK | 160 |
Exports:GSE280465GSE280465_GPL33022_EPICv2
Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrExperimentHubfastmapfilelockgenericsgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| GSE280465 EPICv2 methylation data in ExperimentHub | GSE280465-package |
| Load the GSE280465 ExperimentHub resource | GSE280465 GSE280465_GPL33022_EPICv2 |
