Package: PTMsToPathwaysData 0.99.4

Lucia Williams

PTMsToPathwaysData: ExperimentHub Data for PTMsToPathways

Companion data package for PTMsToPathways that registers large post-translational modification data resources and intermediate processed data for vignettes in ExperimentHub.

Authors:Lucia Williams [aut, cre], Mark Grimes [aut]

PTMsToPathwaysData_0.99.4.tar.gz
PTMsToPathwaysData_0.99.4.zip(r-4.7-any)PTMsToPathwaysData_0.99.4.zip(r-4.6-any)PTMsToPathwaysData_0.99.4.zip(r-4.5-any)
PTMsToPathwaysData_0.99.4.tgz(r-4.6-any)PTMsToPathwaysData_0.99.4.tgz(r-4.5-any)
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PTMsToPathwaysData_0.99.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
PTMsToPathwaysData/json (API)

# Install 'PTMsToPathwaysData' in R:

install.packages('PTMsToPathwaysData', repos = c('https://biocstaging.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/um-applied-algorithms-lab/ptmstopathwaysdata/issues

On CRAN:

experimenthub cancerdata massspectrometrydata

2.70 score 1 exports 57 dependencies

Last updated from:4035711cb9. Checks:1 NOTE, 9 OK. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	173
linux-devel	OK	216
source / vignettes	OK	227
linux-release	OK	180
macos-release	OK	166
macos-oldrel	OK	181
windows-devel	OK	145
windows-release	OK	134
windows-oldrel	OK	111
wasm-release	OK	139

Exports:PTMsToPathwaysData

Dependencies:AnnotationDbi AnnotationHub askpass Biobase BiocBaseUtils BiocFileCache BiocGenerics BiocManager BiocVersion Biostrings bit bit64 blob cachem cli cpp11 crayon curl DBI dbplyr dplyr ExperimentHub fastmap filelock generics glue httr httr2 IRanges jsonlite KEGGREST lifecycle magrittr memoise mime openssl pillar pkgconfig png purrr R6 rappdirs rlang RSQLite S4Vectors Seqinfo stringi stringr sys tibble tidyr tidyselect utf8 vctrs withr XVector yaml

Accessing PTMsToPathwaysData from ExperimentHub

Connect to ExperimentHub | Find PTMsToPathwaysData records | Download a resource | Inspect downloaded objects | Session info

Rendered fromaccess-experimenthub-data.Rmdusingknitr::rmarkdown

Last update: 2026-07-01
Started: 2026-07-01

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
PTMsToPathwaysData: ExperimentHub Data for PTMsToPathways	PTMsToPathwaysData-package
Query PTMsToPathways Data Resources in ExperimentHub	PTMsToPathwaysData