Package: bHIVE 0.99.4

Nick Borcherding

bHIVE: B-cell Hybrid Immune Variant Engine

The bHIVE package implements an Artificial Immune Network (AI-Net) algorithm for clustering and classification tasks. Inspired by biological immune systems, it employs clonal selection, mutation, and network suppression to analyze and model datasets. This package provides flexible functionality, including affinity metrics, mutation strategies, and hyperparameter tuning.

Authors:Nick Borcherding [aut, cre]

bHIVE_0.99.4.tar.gz
bHIVE_0.99.4.zip(r-4.7)bHIVE_0.99.4.zip(r-4.6)bHIVE_0.99.4.zip(r-4.5)
bHIVE_0.99.4.tgz(r-4.6-x86_64)bHIVE_0.99.4.tgz(r-4.6-arm64)bHIVE_0.99.4.tgz(r-4.5-x86_64)bHIVE_0.99.4.tgz(r-4.5-arm64)
bHIVE_0.99.4.tar.gz(r-4.7-arm64)bHIVE_0.99.4.tar.gz(r-4.7-x86_64)bHIVE_0.99.4.tar.gz(r-4.6-arm64)bHIVE_0.99.4.tar.gz(r-4.6-x86_64)
bHIVE_0.99.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
bHIVE/json (API)
NEWS

# Install 'bHIVE' in R:
install.packages('bHIVE', repos = c('https://biocstaging.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/borchlab/bhive/issues

Pkgdown/docs site:https://www.borch.dev

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

softwareclusteringclassificationnetworkopenblascpp

3.40 score 8 scripts 19 exports 47 dependencies

Last updated from:183b0ab492. Checks:1 WARNING, 13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING209
linux-devel-arm64OK253
linux-devel-x86_64OK268
source / vignettesOK314
linux-release-arm64OK267
linux-release-x86_64OK266
macos-release-arm64OK227
macos-release-x86_64OK567
macos-oldrel-arm64OK241
macos-oldrel-x86_64OK364
windows-develOK242
windows-releaseOK233
windows-oldrelOK218
wasm-releaseOK188

Exports:ActivationGateAINetbHIVEbHIVEmodelClassSwitcherConvergentSelectorGerminalCenterhoneycombHIVEhoneycombHIVEmodelIdiotypicNetworkImmuneAlgorithmImmuneRepertoireMemoryPoolMicroenvironmentrefineBSHMEngineswarmbHIVEVDJLibraryvisualizeHIVE

Dependencies:askpassBHBiocParallelcliclusterclusterCritcodetoolscpp11farverformatRfutile.loggerfutile.optionsggplot2gluegridExtragtablehereisobandjsonlitelabelinglambda.rlatticelifecycleMatrixopensslpngR6rappdirsRColorBrewerRcppRcppArmadilloRcppEigenRcppTOMLreticulaterlangrprojrootRSpectraRtsneS7scalessnowsysumapvctrsviridisviridisLitewithr

The buzz on using bHIVE

Nick Borcherding

Rendered frombHIVE.Rmdusingknitr::rmarkdownon Jun 09 2026.

Last update: 2026-04-30
Started: 2025-01-17