Package: gdscloud 0.99.2

Xiuwen Zheng

gdscloud: Cloud Storage Access for GDS Files

Provides read-only access to GDS (Genomic Data Structure) files stored on cloud storage services including Amazon S3, Google Cloud Storage (GCS), and Azure Blob Storage, as well as any HTTP/HTTPS URL. Extends the 'gdsfmt' package to transparently open GDS files from cloud URLs (http://, https://, s3://, gs://, az://) using efficient block caching and HTTP Range requests via libcurl.

Authors:Xiuwen Zheng [aut, cre]

gdscloud_0.99.2.tar.gz
gdscloud_0.99.2.zip(r-4.7)gdscloud_0.99.2.zip(r-4.6)gdscloud_0.99.2.zip(r-4.5)
gdscloud_0.99.2.tgz(r-4.6-x86_64)gdscloud_0.99.2.tgz(r-4.6-arm64)gdscloud_0.99.2.tgz(r-4.5-x86_64)gdscloud_0.99.2.tgz(r-4.5-arm64)
gdscloud_0.99.2.tar.gz(r-4.7-arm64)gdscloud_0.99.2.tar.gz(r-4.7-x86_64)gdscloud_0.99.2.tar.gz(r-4.6-arm64)gdscloud_0.99.2.tar.gz(r-4.6-x86_64)
gdscloud_0.99.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
gdscloud/json (API)
NEWS

# Install 'gdscloud' in R:
install.packages('gdscloud', repos = c('https://biocstaging.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/zhengxwen/gdscloud/issues

Uses libs:
  • curl– Easy-to-use client-side URL transfer library
  • openssl– Secure Sockets Layer toolkit
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

infrastructuredataimportcurlopensslcpp

3.40 score 11 exports 1 dependencies

Last updated from:9ba6156daf. Checks:1 NOTE, 13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE174
linux-devel-arm64OK175
linux-devel-x86_64OK148
source / vignettesOK207
linux-release-arm64OK157
linux-release-x86_64OK148
macos-release-arm64OK81
macos-release-x86_64OK257
macos-oldrel-arm64OK80
macos-oldrel-x86_64OK254
windows-develOK191
windows-releaseOK175
windows-oldrelOK180
wasm-releaseOK212

Exports:gdsCloudCacheCleargdsCloudCacheInfogdsCloudCacheSizegdsCloudConfigAzuregdsCloudConfigGCSgdsCloudConfigHTTPgdsCloudConfigS3gdsCloudExportCredentialsgdsCloudListgdsCloudOpengdsCloudSchemes

Dependencies:gdsfmt

Cloud Storage Access for GDS Files

Xiuwen Zheng

Rendered fromgdscloud.Rmdusingknitr::rmarkdownon Jun 16 2026.

Last update: 2026-06-16
Started: 2026-04-29

Readme and manuals

Help Manual

Help pageTopics
Cache Control for Cloud GDS AccessgdsCloudCacheClear gdsCloudCacheInfo gdsCloudCacheSize
Configure HTTP/HTTPS CredentialsgdsCloudConfigHTTP
Configure Cloud Storage CredentialsgdsCloudConfigAzure gdsCloudConfigGCS gdsCloudConfigS3
Export Cloud Credentials to Child ProcessesgdsCloudExportCredentials
List Open Cloud StreamsgdsCloudList
Open a GDS File from Cloud StoragegdsCloudOpen
List Supported Cloud URL SchemesgdsCloudSchemes